Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 HSPA8P1-201ENST00000425843 1833 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 PRO1804-201ENST00000623780 2050 ntBASIC3.63□□□□□ -1.83
CCDC187A0A096LP49 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 API5P2-201ENST00000397055 1498 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC066616.2-201ENST00000559334 1481 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RNA5SP51-201ENST00000364750 119 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 SNORD115-7-201ENST00000365306 82 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RNU6-907P-201ENST00000390924 102 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 SOD2P1-201ENST00000396543 562 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AL136116.1-201ENST00000403591 381 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RN7SKP32-201ENST00000410167 303 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RNU2-29P-201ENST00000410423 189 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RNU6-1068P-201ENST00000410958 103 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RNU6-1148P-201ENST00000410992 104 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RN7SKP140-201ENST00000411196 284 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 ATP5A1P2-201ENST00000412323 255 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AL353678.1-201ENST00000422735 741 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 MTCYBP8-201ENST00000422855 651 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 ATP5JP1-201ENST00000431631 322 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 GPM6BP2-201ENST00000432046 144 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AL159987.2-201ENST00000432754 307 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RPL36AP53-201ENST00000432891 316 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 NEFMP1-201ENST00000443423 1006 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 GPM6BP1-201ENST00000446387 144 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 CEACAMP4-201ENST00000457676 421 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 SNORD105B-201ENST00000458770 79 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 SNRPGP3-201ENST00000469405 227 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 SNORA19.2-201ENST00000516013 114 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 RN7SKP219-201ENST00000516825 296 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC067852.3-201ENST00000589177 561 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC244505.7-201ENST00000599675 272 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC174048.1-201ENST00000603389 144 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC021646.1-201ENST00000605469 484 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC011155.2-201ENST00000623202 216 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCDC187A0A096LP49 ZNF962P-201ENST00000443465 3140 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AL139276.1-201ENST00000311910 1001 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 RPL7P26-201ENST00000333817 754 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.144-201ENST00000363521 113 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 RNU6-1029P-201ENST00000384109 107 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 RPL21P23-201ENST00000446654 460 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AC103851.1-201ENST00000506833 274 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 HMGB3P15-201ENST00000507326 574 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AL359273.1-201ENST00000510918 627 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 SNORA70.14-201ENST00000516205 110 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 IGKV2-38-201ENST00000517443 247 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AP005435.4-201ENST00000529514 284 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 OR5B10P-201ENST00000532869 642 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AC243972.3-201ENST00000539655 198 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 ELOCP31-201ENST00000540463 467 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 SYF2P1-201ENST00000550658 413 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 MIR4703-201ENST00000577728 79 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AC104763.2-201ENST00000604179 382 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AC113139.1-201ENST00000605049 239 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AP002826.1-201ENST00000608835 315 ntBASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CCDC187A0A096LP49 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms