Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 U3.11-201ENST00000364476 212 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 RNU2-62P-201ENST00000410868 191 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AL137014.1-201ENST00000420490 1226 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 RPL23AP30-201ENST00000432419 501 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 RPL23AP20-201ENST00000447965 421 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 RPS15AP36-201ENST00000492022 382 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC114797.1-201ENST00000514003 728 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 Y_RNA.693-201ENST00000516641 110 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC022690.1-201ENST00000526681 550 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 RPS3AP4-201ENST00000555161 764 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC105224.1-201ENST00000587055 421 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC008962.1-201ENST00000605729 304 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC073476.4-201ENST00000628409 72 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 AC090740.1-201ENST00000623193 2262 ntBASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SNX9Q9Y5X1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 RNU6-483P-201ENST00000384088 108 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 MIR483-201ENST00000385070 76 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC068050.1-201ENST00000394891 380 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 RNA5SP107-201ENST00000411358 122 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 CCDC58P2-201ENST00000417131 366 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 MTATP6P18-201ENST00000417994 673 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 PPP1R11P2-201ENST00000423543 382 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC137499.1-201ENST00000427602 88 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 RPL35AP22-201ENST00000436855 335 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 MTATP6P23-201ENST00000440153 476 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AL049714.1-201ENST00000466686 347 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC092989.1-201ENST00000481235 277 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 RN7SL283P-201ENST00000489055 303 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 MTAPP1-201ENST00000489154 819 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 Y_RNA.704-201ENST00000516851 102 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 ERHP1-201ENST00000523006 310 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC104383.1-201ENST00000530297 370 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 ARL2BPP2-201ENST00000550907 489 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC125611.2-201ENST00000551907 647 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC234778.2-201ENST00000566241 354 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 SNORA59B-202ENST00000578183 701 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 TUG1_2.1-201ENST00000614234 87 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC006111.3-201ENST00000622137 383 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC139792.3-201ENST00000623525 224 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 MIR1321-201ENST00000637766 79 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 AC103988.1-201ENST00000566382 2177 ntBASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNX9Q9Y5X1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 MTCO1P9-201ENST00000505577 1534 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 SNORD56.2-201ENST00000363242 71 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 RNU6-1097P-201ENST00000363586 107 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 Y_RNA.390-201ENST00000383932 102 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 RNU6-432P-201ENST00000384196 109 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 RNU6-456P-201ENST00000384493 107 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 MIR1-2-201ENST00000384961 85 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 RNU6-278P-201ENST00000390945 109 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 RNU6-882P-201ENST00000391025 103 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 RNU1-101P-201ENST00000391171 127 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 AL109755.1-201ENST00000401791 649 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 AL354719.1-201ENST00000406535 843 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 MIR1277-201ENST00000408536 78 ntBASIC3.34□□□□□ -1.87
SNX9Q9Y5X1 USP9YP6-201ENST00000413550 854 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms