Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC104458.1-201ENST00000608243 463 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AL359837.1-201ENST00000381357 287 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 MIR449B-201ENST00000384995 97 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 MIR325-201ENST00000385260 98 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 RNA5SP171-201ENST00000391071 115 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 CISD1P1-201ENST00000393907 327 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 RNU2-29P-201ENST00000410423 189 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AL451062.2-201ENST00000427515 271 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 RPL21P23-201ENST00000446654 460 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 FGF7P6-202ENST00000451282 293 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 GMFBP1-201ENST00000467831 427 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 RPL7P5-201ENST00000471472 736 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 RPL39P36-201ENST00000490784 156 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AC109927.2-201ENST00000506416 303 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AC092436.1-201ENST00000506450 503 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AC010265.1-201ENST00000513509 211 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 RNA5SP471-201ENST00000516971 106 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 MIR4703-201ENST00000577728 79 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AC008521.1-201ENST00000587471 187 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 NRBF2P5-201ENST00000603087 788 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 AC107294.1-201ENST00000609524 467 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 uc_338.11-201ENST00000619132 160 ntBASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 FER-210ENST00000628534 558 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CLDN16Q9Y5I7 MAPK10-362ENST00000641864 4484 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC006504.1-201ENST00000562493 3666 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AL049781.1-201ENST00000623195 3585 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 ZNF826P-207ENST00000622273 1910 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 RN7SKP285-201ENST00000410137 318 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 Z85995.1-201ENST00000415547 335 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 HSPE1P1-201ENST00000421494 318 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 MTND1P2-201ENST00000430604 821 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 HMGN2P31-201ENST00000432430 273 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC000111.3-201ENST00000433478 193 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 DPPA3P1-201ENST00000448050 469 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC073415.1-201ENST00000449240 153 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 ELOCP23-201ENST00000452014 332 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 SNRPFP3-201ENST00000457792 225 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC104472.2-201ENST00000469035 601 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 RPL32P34-201ENST00000486380 400 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-835P-201ENST00000516974 104 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC007458.1-201ENST00000542812 373 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC098826.3-201ENST00000603823 466 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC244205.2-202ENST00000635781 342 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms