Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC006989.1-201ENST00000427212 131 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AL117339.2-201ENST00000430475 180 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RPS24P13-201ENST00000442520 397 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC093019.1-201ENST00000443135 252 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RPL37P6-201ENST00000460682 294 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC012181.1-201ENST00000479895 423 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RN7SL323P-201ENST00000494712 295 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RNU2-58P-201ENST00000516403 183 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RPL7P20-201ENST00000520308 745 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AP006245.1-201ENST00000522549 120 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC008011.1-201ENST00000545989 227 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AL606490.9-201ENST00000603331 271 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC098826.3-201ENST00000603823 466 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC106900.2-201ENST00000604994 317 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 AC021646.1-201ENST00000605469 484 ntBASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHA3Q9Y5H8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AC058791.1-201ENST00000608412 3198 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 SPRR2C-201ENST00000290702 219 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 SNORD81.2-201ENST00000365153 76 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 Y_RNA.373-201ENST00000365600 103 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-434P-201ENST00000384376 107 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-393P-201ENST00000384475 107 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 SNORD70.1-201ENST00000391007 85 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 RNA5SP129-201ENST00000410276 118 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 SNORA57.3-201ENST00000411095 141 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 POLHP1-201ENST00000411806 470 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 MTND3P8-201ENST00000412909 339 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AL451062.2-201ENST00000427515 271 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AC017083.1-201ENST00000428093 483 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 MTND3P23-201ENST00000431980 347 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 TAAR7P-201ENST00000436141 242 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 HSFY6P-201ENST00000445573 403 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 MRPS31P2-201ENST00000451581 518 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AC004801.2-202ENST00000463559 283 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 RPL21P104-201ENST00000464143 478 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 RPL21P93-201ENST00000480465 489 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AL160314.1-201ENST00000490836 438 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AC026784.1-201ENST00000507986 352 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 MTND3P22-201ENST00000510932 243 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 TTC39CP1-201ENST00000512513 755 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AC112206.3-201ENST00000514578 389 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-1038P-201ENST00000516516 104 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 RNA5SP471-201ENST00000516971 106 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 BTF3P12-201ENST00000519620 469 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AC022690.1-201ENST00000526681 550 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AC106782.4-201ENST00000568264 210 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 VN1R85P-201ENST00000601587 426 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AL161798.1-201ENST00000604630 131 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 RNU1-30P-201ENST00000606575 163 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AC103705.1-201ENST00000619013 241 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 FP236240.3-201ENST00000623061 327 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AP003400.5-201ENST00000624827 617 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 MTND1P37-201ENST00000636562 264 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 AP004289.2-201ENST00000444413 1457 ntBASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHA3Q9Y5H8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-371P-201ENST00000364283 108 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-715P-201ENST00000365204 103 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-741P-201ENST00000383889 107 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 SNORA32.2-201ENST00000384049 122 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 SNORA16.2-201ENST00000390991 127 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 RNU2-33P-201ENST00000410344 192 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 USP9YP20-201ENST00000419224 558 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms