Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CR848007.1-201ENST00000442354 1699 ntBASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 SNORD114-23-201ENST00000363536 72 ntBASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 TATDN1P1-201ENST00000414123 891 ntBASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 RPL31P35-201ENST00000431058 377 ntBASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 AL645638.1-201ENST00000440519 361 ntBASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 TRGVB-201ENST00000453257 471 ntBASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 RNU7-26P-201ENST00000458980 63 ntBASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 AL022578.1-201ENST00000439330 1433 ntBASIC1.42□□□□□ -2.18
SHANK2Q9UPX8 RNU1-105P-201ENST00000363470 161 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 RNU6-244P-201ENST00000391028 104 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 UBE2V1P9-201ENST00000414760 368 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 AL358176.2-201ENST00000425769 204 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 AC010099.1-201ENST00000455434 375 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 AC096751.1-202ENST00000502691 1067 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 AC087481.2-201ENST00000565492 330 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 MTCO2P22-201ENST00000603246 681 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 FAM71BP1-201ENST00000604431 523 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 AP001486.3-201ENST00000615334 372 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 MIR2909-201ENST00000617113 69 ntBASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.41□□□□□ -2.18
SHANK2Q9UPX8 SNORD14B-201ENST00000364533 90 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AL513475.1-201ENST00000406602 315 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AC234064.1-201ENST00000436312 247 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 JTBP1-201ENST00000441314 247 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 RPS29P28-201ENST00000446439 141 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AL500527.1-201ENST00000448532 255 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AC026801.1-201ENST00000497178 464 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 KATNBL1P4-201ENST00000503545 918 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AC108157.1-201ENST00000510511 539 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AC008269.2-201ENST00000561915 1105 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 OR1M4P-201ENST00000589199 287 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AC103810.9-201ENST00000606688 112 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AC025594.3-201ENST00000613068 790 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AC091304.6-201ENST00000619761 202 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 AL137003.2-201ENST00000606924 2538 ntBASIC1.4□□□□□ -2.19
SHANK2Q9UPX8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 OR6C66P-201ENST00000414917 930 ntBASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AC092648.1-201ENST00000425870 423 ntBASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AL356867.1-201ENST00000429623 299 ntBASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 RNU6-970P-201ENST00000516312 107 ntBASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AP003072.2-201ENST00000527756 676 ntBASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 AC012254.4-201ENST00000588843 273 ntBASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 UCA1.1-201ENST00000620952 75 ntBASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 MTND4P12-201ENST00000498999 1377 ntBASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SHANK2Q9UPX8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 SNORA3A-201ENST00000364113 130 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 RNU6-1293P-201ENST00000384077 107 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 RNU11-5P-201ENST00000391216 129 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 MIR936-201ENST00000401264 98 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 RNU6-920P-201ENST00000410926 92 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 RNA5SP450-201ENST00000411206 102 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 RPL21P90-201ENST00000415692 466 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AC009296.1-201ENST00000443146 155 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 ANKRD26P4-201ENST00000455755 950 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 CABYRP1-201ENST00000465493 1045 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 RPS27P26-201ENST00000494583 239 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 EIF4EP3-201ENST00000498782 656 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 NDUFB4P2-201ENST00000509515 391 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AC104108.1-201ENST00000509930 412 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 MRPS33P3-201ENST00000513456 322 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AC104229.1-201ENST00000561364 255 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 DUXAP11-201ENST00000603858 526 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AC073111.2-201ENST00000605657 1075 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 RNU6-156P-201ENST00000621869 107 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 AC018630.2-201ENST00000534866 2403 ntBASIC1.38□□□□□ -2.19
SHANK2Q9UPX8 DEFB108F-201ENST00000344638 222 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms