Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 MIR4298-201ENST00000584380 73 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC060766.3-201ENST00000591442 263 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AP000811.1-201ENST00000603803 651 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC013553.2-201ENST00000604244 589 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AL021997.1-201ENST00000605757 193 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC004852.3-201ENST00000614131 326 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC090582.1-201ENST00000636321 199 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AL390237.1-201ENST00000404226 1415 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 FAM133CP-201ENST00000332869 704 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 RNU6-462P-201ENST00000362659 105 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 RNU1-105P-201ENST00000363470 161 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 Y_RNA.194-201ENST00000363985 102 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 SNORA67.4-201ENST00000384688 142 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 RNU6-754P-201ENST00000391166 107 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 RNU6-192P-201ENST00000391253 100 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AL365203.2-201ENST00000423444 196 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 MYL8P-204ENST00000431574 518 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 MTND3P1-201ENST00000441336 220 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 PAXBP1P1-201ENST00000449315 447 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 RPL31P3-201ENST00000458430 332 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 RNU6-420P-201ENST00000458780 107 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AP000852.1-201ENST00000472460 573 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 RNU6-232P-201ENST00000517144 64 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AC105185.1-201ENST00000518705 535 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AC134698.4-201ENST00000523451 826 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AGGF1P4-201ENST00000568249 801 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 VN1R82P-201ENST00000601481 356 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AC105129.3-201ENST00000605455 485 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AL603758.1-201ENST00000618654 241 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 Z69908.1-201ENST00000622603 247 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AC079248.2-201ENST00000623779 326 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AC007494.3-201ENST00000624660 743 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 AC010149.2-201ENST00000637608 315 ntBASIC2.97□□□□□ -1.93
CLIP2Q9UDT6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.96□□□□□ -1.93
CLIP2Q9UDT6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 MIR6073-201ENST00000352083 89 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RNA5SP393-201ENST00000363423 117 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RNU6-289P-201ENST00000364093 107 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RNU6-777P-201ENST00000364265 104 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC083875.1-201ENST00000419509 405 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC129850.1-201ENST00000436203 508 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 MTND1P1-201ENST00000445453 368 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AL109741.2-201ENST00000455561 343 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RN7SL429P-201ENST00000479090 223 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RN7SL489P-201ENST00000486185 223 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RN7SL327P-201ENST00000488659 223 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC107401.1-201ENST00000503426 685 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RPF2P2-201ENST00000504693 896 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RNU6-1282P-201ENST00000516735 96 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC109329.2-201ENST00000519658 482 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 CKS1BP7-201ENST00000522230 235 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC124947.2-202ENST00000552735 133 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 MIR3915-201ENST00000578518 97 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RSL24D1P11-201ENST00000591045 491 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC107304.1-201ENST00000604229 296 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC007621.1-201ENST00000604544 437 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC064872.1-201ENST00000604823 1072 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC013476.2-201ENST00000614456 459 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 RN7SL853P-201ENST00000617250 223 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC099842.1-201ENST00000619919 596 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 U4.3-201ENST00000621047 82 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 AC091931.1-201ENST00000623488 728 ntBASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP2Q9UDT6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 RNU6-623P-201ENST00000363143 105 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 RNU6-553P-201ENST00000364047 96 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 RNU6-157P-201ENST00000383957 107 ntBASIC2.95□□□□□ -1.94
CLIP2Q9UDT6 RNU6-114P-201ENST00000384704 105 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms