Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC005951.2-201ENST00000576282 495 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 ARF4P1-201ENST00000605447 541 ntBASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PPARGC1AQ9UBK2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC007823.1-201ENST00000569932 1566 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 DEFB108F-201ENST00000344638 222 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-1040P-201ENST00000383974 107 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 RPL31P12-201ENST00000422587 358 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC017037.1-201ENST00000508460 471 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 RNU1-54P-201ENST00000517181 120 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC069113.1-201ENST00000517763 267 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC009902.1-201ENST00000519351 183 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC136624.4-201ENST00000573044 370 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC136443.5-201ENST00000603741 370 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC107294.1-201ENST00000609524 467 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AC048347.1-201ENST00000624621 427 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 AL669831.3-213ENST00000636676 183 ntBASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.31□□□□□ -1.72
PPARGC1AQ9UBK2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 MARK2P15-201ENST00000432204 2186 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-600P-201ENST00000362524 99 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 RNU5A-1-201ENST00000362698 116 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 SNORA70.2-201ENST00000364506 135 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-310P-201ENST00000384655 107 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 HSPE1P8-201ENST00000406997 288 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 RNA5SP306-201ENST00000411087 107 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 BX842559.1-201ENST00000419615 532 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 RPL7P37-201ENST00000425095 738 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 UBE2V1P4-201ENST00000425374 344 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC073063.1-201ENST00000434352 607 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 MRPS31P2-201ENST00000451581 518 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 MTCO3P10-201ENST00000455912 772 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 RNU7-138P-201ENST00000459479 64 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC097473.1-201ENST00000508142 408 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-1332P-201ENST00000516666 104 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 Y_RNA.708-201ENST00000516950 96 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 MRPL49P2-201ENST00000521066 465 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC026371.1-201ENST00000551867 419 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC025884.1-201ENST00000556034 378 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 RPL23AP87-202ENST00000573039 466 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC012119.1-201ENST00000603184 222 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC025946.2-201ENST00000603398 234 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AL590392.1-201ENST00000604960 446 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AC023043.4-201ENST00000612081 449 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 PISRT1.1-201ENST00000616930 107 ntBASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PPARGC1AQ9UBK2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PPARGC1AQ9UBK2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PPARGC1AQ9UBK2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PPARGC1AQ9UBK2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.29□□□□□ -1.72
PPARGC1AQ9UBK2 RNU6-266P-201ENST00000364225 107 ntBASIC4.29□□□□□ -1.72
PPARGC1AQ9UBK2 RNA5SP235-201ENST00000365411 114 ntBASIC4.29□□□□□ -1.72
PPARGC1AQ9UBK2 SNORA75B-201ENST00000384053 137 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms