Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.63□□□□□ -2.31
CHD7Q9P2D1 VN1R42P-201ENST00000424651 344 ntBASIC0.63□□□□□ -2.31
CHD7Q9P2D1 AL353689.1-201ENST00000438895 199 ntBASIC0.63□□□□□ -2.31
CHD7Q9P2D1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.63□□□□□ -2.31
CHD7Q9P2D1 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.63□□□□□ -2.31
CHD7Q9P2D1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CHD7Q9P2D1 RNU6-928P-201ENST00000516876 104 ntBASIC0.63□□□□□ -2.31
CHD7Q9P2D1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.63□□□□□ -2.31
CHD7Q9P2D1 AC022387.2-201ENST00000604050 448 ntBASIC0.63□□□□□ -2.31
CHD7Q9P2D1 SNORA38-201ENST00000363946 132 ntBASIC0.62□□□□□ -2.31
CHD7Q9P2D1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.62□□□□□ -2.31
CHD7Q9P2D1 AC103851.1-201ENST00000506833 274 ntBASIC0.62□□□□□ -2.31
CHD7Q9P2D1 AC078899.2-201ENST00000595282 212 ntBASIC0.62□□□□□ -2.31
CHD7Q9P2D1 AL136363.1-201ENST00000605349 337 ntBASIC0.62□□□□□ -2.31
CHD7Q9P2D1 AC022079.2-201ENST00000619739 566 ntBASIC0.62□□□□□ -2.31
CHD7Q9P2D1 HAUS6P2-201ENST00000433254 2404 ntBASIC0.62□□□□□ -2.31
CHD7Q9P2D1 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
CHD7Q9P2D1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.62□□□□□ -2.31
CHD7Q9P2D1 CASP3P1-201ENST00000446037 609 ntBASIC0.62□□□□□ -2.31
CHD7Q9P2D1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.62□□□□□ -2.31
CHD7Q9P2D1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.62□□□□□ -2.31
CHD7Q9P2D1 EIF4A1P12-201ENST00000551910 141 ntBASIC0.62□□□□□ -2.31
CHD7Q9P2D1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.62□□□□□ -2.31
CHD7Q9P2D1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHD7Q9P2D1 ZNF702P-202ENST00000434269 1966 ntBASIC0.61□□□□□ -2.31
CHD7Q9P2D1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CHD7Q9P2D1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD7Q9P2D1 RNU1-98P-201ENST00000458992 160 ntBASIC0.61□□□□□ -2.31
CHD7Q9P2D1 LINC00933-203ENST00000559812 219 ntBASIC0.61□□□□□ -2.31
CHD7Q9P2D1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.61□□□□□ -2.31
CHD7Q9P2D1 LLPHP1-201ENST00000603571 367 ntBASIC0.61□□□□□ -2.31
CHD7Q9P2D1 RNU6-1077P-201ENST00000410506 102 ntBASIC0.61□□□□□ -2.31
CHD7Q9P2D1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD7Q9P2D1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD7Q9P2D1 AC097493.1-201ENST00000463958 372 ntBASIC0.61□□□□□ -2.31
CHD7Q9P2D1 RPS27P26-201ENST00000494583 239 ntBASIC0.61□□□□□ -2.31
CHD7Q9P2D1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.61□□□□□ -2.31
CHD7Q9P2D1 RNA5SP468-201ENST00000516782 93 ntBASIC0.61□□□□□ -2.31
CHD7Q9P2D1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD7Q9P2D1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD7Q9P2D1 AC003001.2-201ENST00000616294 831 ntBASIC0.61□□□□□ -2.31
CHD7Q9P2D1 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CHD7Q9P2D1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CHD7Q9P2D1 FTH1P15-201ENST00000406984 280 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 AL591043.1-201ENST00000432461 424 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 AC093716.1-201ENST00000435923 377 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.6□□□□□ -2.31
CHD7Q9P2D1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CHD7Q9P2D1 RPL31P52-201ENST00000407532 367 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 OR5AL2P-201ENST00000532185 920 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 MIR4723-201ENST00000585070 81 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.6□□□□□ -2.31
CHD7Q9P2D1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.6□□□□□ -2.31
CHD7Q9P2D1 SNORA7.2-201ENST00000364446 145 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.6□□□□□ -2.31
CHD7Q9P2D1 AL035666.1-201ENST00000446195 348 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.6□□□□□ -2.31
CHD7Q9P2D1 C1DP3-201ENST00000455013 423 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 AC010683.1-201ENST00000473673 378 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 AC098591.2-201ENST00000510152 315 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 OSBPL9P3-201ENST00000534523 595 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 AC021646.1-201ENST00000605469 484 ntBASIC0.6□□□□□ -2.31
CHD7Q9P2D1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.6□□□□□ -2.31
CHD7Q9P2D1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.59□□□□□ -2.31
CHD7Q9P2D1 RNA5SP299-201ENST00000391203 116 ntBASIC0.59□□□□□ -2.31
CHD7Q9P2D1 AC244453.4-201ENST00000419150 388 ntBASIC0.59□□□□□ -2.31
CHD7Q9P2D1 AC246680.2-201ENST00000422106 389 ntBASIC0.59□□□□□ -2.31
CHD7Q9P2D1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.59□□□□□ -2.31
CHD7Q9P2D1 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.31
CHD7Q9P2D1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.59□□□□□ -2.31
CHD7Q9P2D1 KLF3P2-201ENST00000465138 268 ntBASIC0.59□□□□□ -2.31
CHD7Q9P2D1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.59□□□□□ -2.31
CHD7Q9P2D1 AC068831.7-201ENST00000616954 363 ntBASIC0.59□□□□□ -2.31
CHD7Q9P2D1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.59□□□□□ -2.32
CHD7Q9P2D1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CHD7Q9P2D1 RNU6-50P-201ENST00000362356 103 ntBASIC0.59□□□□□ -2.32
CHD7Q9P2D1 AL133384.1-201ENST00000412744 351 ntBASIC0.59□□□□□ -2.32
CHD7Q9P2D1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.59□□□□□ -2.32
CHD7Q9P2D1 Z99497.1-201ENST00000421282 135 ntBASIC0.59□□□□□ -2.32
CHD7Q9P2D1 RPS24P6-201ENST00000452670 400 ntBASIC0.59□□□□□ -2.32
CHD7Q9P2D1 RPS27P23-201ENST00000487608 251 ntBASIC0.59□□□□□ -2.32
CHD7Q9P2D1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CHD7Q9P2D1 RNA5SP285-201ENST00000516619 119 ntBASIC0.59□□□□□ -2.32
CHD7Q9P2D1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.59□□□□□ -2.32
CHD7Q9P2D1 AL109918.3-201ENST00000603072 338 ntBASIC0.59□□□□□ -2.32
CHD7Q9P2D1 RNU6-1072P-201ENST00000384703 107 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 RNU6-443P-201ENST00000384780 107 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 RN7SKP61-201ENST00000410642 295 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 SNORA31.25-201ENST00000517242 134 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 ERHP1-201ENST00000523006 310 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.58□□□□□ -2.32
CHD7Q9P2D1 FAM157A-202ENST00000615155 405 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 AP006248.3-201ENST00000623580 594 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 MIR607-201ENST00000385241 96 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CHD7Q9P2D1 SFR1P1-201ENST00000403720 688 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 MTCO2P32-201ENST00000514865 403 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 AL592148.2-201ENST00000612210 372 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 AC243829.3-201ENST00000622177 108 ntBASIC0.58□□□□□ -2.32
CHD7Q9P2D1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms