Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC026782.1-201ENST00000512952 449 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 Y_RNA.708-201ENST00000516950 96 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 MRPL49P2-201ENST00000521066 465 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 TOMM20P2-201ENST00000540082 421 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AC008737.2-201ENST00000599446 118 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 NUTF2P8-201ENST00000604593 363 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AP000654.2-201ENST00000605633 586 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 MIR432-201ENST00000606207 94 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 MIR4727-201ENST00000622232 55 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AL031601.2-202ENST00000622650 282 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AC092608.2-201ENST00000624427 218 ntBASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.98□□□□□ -1.77
KCMF1Q9P0J7 AL049641.1-201ENST00000441055 1948 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 Y_RNA.28-201ENST00000362554 111 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 SNORD3E-201ENST00000362899 217 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 RNU6-1040P-201ENST00000383974 107 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 SNORA75B-201ENST00000384053 137 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 RNU6-890P-201ENST00000384121 107 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 MIR1179-201ENST00000408703 91 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC004975.1-201ENST00000428733 208 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 snoU13.4-201ENST00000458916 104 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 RNU7-138P-201ENST00000459479 64 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 RPL7P42-201ENST00000481005 679 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC097473.1-201ENST00000508142 408 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC092436.3-201ENST00000511788 257 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 Y_RNA.670-201ENST00000516255 105 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC069113.1-201ENST00000517763 267 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 RNU6-988P-201ENST00000519081 107 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AP003730.1-201ENST00000524605 285 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC063950.1-201ENST00000552036 308 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AL161798.1-201ENST00000604630 131 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AP000942.4-201ENST00000604811 241 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 RNU6-85P-201ENST00000605989 107 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC107294.1-201ENST00000609524 467 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 AC064801.1-201ENST00000612025 407 ntBASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
KCMF1Q9P0J7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KCMF1Q9P0J7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 SNORD62.1-201ENST00000362541 86 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.145-201ENST00000363527 102 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 RN7SKP227-201ENST00000364445 330 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.459-201ENST00000384251 102 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 SNORA70C-201ENST00000384538 135 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 RPS26P8-201ENST00000393490 348 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.594-201ENST00000410373 140 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 HMGB1P9-201ENST00000429856 646 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AC236972.1-201ENST00000433225 199 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 HLA-N-201ENST00000437516 135 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 RANP8-201ENST00000444720 713 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 HMGN2P21-201ENST00000447764 270 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 RNA5SP246-201ENST00000458909 119 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 RPS26P15-201ENST00000488067 348 ntBASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.96□□□□□ -1.78
KCMF1Q9P0J7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms