Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 SNORA51.4-201ENST00000364993 124 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 CD24P4-201ENST00000382840 243 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 RNU6-1197P-201ENST00000391183 107 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 RPS3AP36-201ENST00000398190 775 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 RPS15AP12-201ENST00000419498 388 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 NUP35P1-201ENST00000422734 947 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC104332.2-201ENST00000429959 156 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 USP9YP14-201ENST00000430663 563 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC087499.2-201ENST00000432861 149 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 RPS24P1-201ENST00000438550 371 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 MTATP6P30-201ENST00000443540 664 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 ELOCP30-201ENST00000447108 299 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 MTND1P12-201ENST00000455231 147 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC108059.3-201ENST00000456388 214 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 snoU109.1-201ENST00000459339 135 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 KLF3P2-201ENST00000465138 268 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC010587.1-201ENST00000505809 469 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 MTND3P5-201ENST00000512798 333 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC114797.1-201ENST00000514003 728 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 SNORA18.6-201ENST00000516792 115 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 RNA5SP337-201ENST00000517007 109 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC007536.1-201ENST00000533382 349 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AGGF1P4-201ENST00000568249 801 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC004223.2-201ENST00000590309 544 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC024153.1-201ENST00000603103 365 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AP000254.1-201ENST00000609934 520 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC090970.3-201ENST00000612566 866 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC011939.3-201ENST00000613686 466 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC006338.1-201ENST00000618453 749 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 AC005832.2-201ENST00000538921 1430 ntBASIC2.85□□□□□ -1.95
NLGN3Q9NZ94 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC062016.1-201ENST00000355719 319 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 RNU6-511P-201ENST00000363496 107 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 U8.9-201ENST00000365667 134 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 SNORA18.3-201ENST00000384122 132 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 Y_RNA.559-201ENST00000384686 107 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 SNORD116-4-201ENST00000384733 96 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 RNA5SP252-201ENST00000391131 119 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 RPL21P24-201ENST00000413752 448 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC063976.3-201ENST00000426849 329 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC093151.1-201ENST00000427711 313 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC244505.4-201ENST00000434905 287 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC104850.1-201ENST00000435940 476 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 SSXP5-201ENST00000443473 287 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 MTND1P27-201ENST00000451117 902 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC010631.1-201ENST00000474150 156 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AL049874.1-201ENST00000489560 388 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 RNU6-1220P-201ENST00000517126 108 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 DNAJC8P1-201ENST00000554535 372 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC012213.3-201ENST00000577199 777 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 MTND1P15-201ENST00000579262 949 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AF038458.1-201ENST00000588406 262 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 HSPE1P7-201ENST00000604681 321 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC090132.2-201ENST00000615881 347 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 AC110994.2-201ENST00000635481 492 ntBASIC2.84□□□□□ -1.95
NLGN3Q9NZ94 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
NLGN3Q9NZ94 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
NLGN3Q9NZ94 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.84□□□□□ -1.96
NLGN3Q9NZ94 AL136360.1-201ENST00000503377 1900 ntBASIC2.83□□□□□ -1.96
NLGN3Q9NZ94 MAPK10-322ENST00000641485 4530 ntBASIC2.83□□□□□ -1.96
NLGN3Q9NZ94 AC233263.6-201ENST00000631132 1963 ntBASIC2.83□□□□□ -1.96
NLGN3Q9NZ94 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NLGN3Q9NZ94 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NLGN3Q9NZ94 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms