Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6-928P-201ENST00000516876 104 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-143P-201ENST00000516942 93 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 RNA5SP503-201ENST00000517047 117 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 RANP3-201ENST00000530970 276 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC008521.1-201ENST00000587471 187 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC008739.3-201ENST00000603262 127 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AL158032.1-201ENST00000605401 106 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC004492.1-201ENST00000607036 742 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC092954.2-201ENST00000609103 430 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 U4.5-201ENST00000617137 123 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 uc_338.11-201ENST00000619132 160 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 PWAR6-201ENST00000552334 4618 ntBASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SLC6A13Q9NSD5 ZNF285B-201ENST00000561698 1767 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 OR4G2P-201ENST00000328113 903 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 RNU1-70P-201ENST00000362618 164 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-1085P-201ENST00000363576 107 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 Y_RNA.409-201ENST00000383990 98 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 Y_RNA.481-201ENST00000384373 102 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AL591704.1-201ENST00000432574 275 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 SNRPEP9-201ENST00000436794 238 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 HIGD1AP11-201ENST00000438361 280 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 DPPA3P1-201ENST00000448050 469 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 ELOCP23-201ENST00000452014 332 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 CECR9-201ENST00000453421 199 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 RPS29P15-201ENST00000458329 171 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 SNORD105B-201ENST00000458770 79 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 snoU13.22-201ENST00000459428 104 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AC006512.1-201ENST00000468816 291 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 HMGN2P13-201ENST00000476476 274 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 ARL4AP2-201ENST00000507378 601 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-685P-201ENST00000517088 95 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AC103843.2-201ENST00000530523 682 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AP000867.2-201ENST00000532468 320 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 MIR15A-201ENST00000607334 83 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AF250324.2-201ENST00000608299 610 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 FTX_3.1-201ENST00000610451 147 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AC011155.2-201ENST00000623202 216 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 Z99571.1-201ENST00000636677 394 ntBASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC6A13Q9NSD5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 SRP72P2-201ENST00000344851 1979 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RNU4-35P-201ENST00000362588 141 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RNA5SP119-201ENST00000362715 117 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-1322P-201ENST00000364309 107 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-1029P-201ENST00000384109 107 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 MIR449B-201ENST00000384995 97 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 Y_RNA.599-201ENST00000410489 109 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 Y_RNA.619-201ENST00000410951 90 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RAB9AP3-201ENST00000412737 573 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 MTCYBP5-201ENST00000423752 1135 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RAB9AP1-201ENST00000449393 573 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RPS15AP34-201ENST00000487776 387 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AC109927.2-201ENST00000506416 303 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AC117522.3-201ENST00000507974 584 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RBBP4P6-201ENST00000508098 202 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms