Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AL008987.1-201ENST00000415528 237 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 BTF3L4P3-201ENST00000418879 476 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 MTCO2P21-201ENST00000419780 677 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 SRIP2-201ENST00000428470 166 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 RPS15AP5-201ENST00000436276 388 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC010631.1-201ENST00000474150 156 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC004263.1-201ENST00000479327 332 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC093809.1-201ENST00000509155 340 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 RNU5F-8P-201ENST00000515941 111 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 SCARNA1-201ENST00000517138 166 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC121758.2-201ENST00000553271 193 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 MIR544B-201ENST00000582372 78 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 ABBA01006766.1-201ENST00000584728 294 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 BNIP3P23-201ENST00000599655 511 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AL121917.1-203ENST00000605534 577 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 RNU6-88P-201ENST00000606801 100 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC024933.1-201ENST00000608472 348 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 FTX_3.1-201ENST00000610451 147 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC103706.2-201ENST00000638080 240 ntBASIC2□□□□□ -2.09
EXOSC4Q9NPD3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
EXOSC4Q9NPD3 AC092125.1-201ENST00000562568 1995 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC016717.2-201ENST00000609089 5141 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 RNU2-33P-201ENST00000410344 192 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 HMGB3P2-201ENST00000411913 584 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 MTND1P23-201ENST00000416931 372 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC010153.1-201ENST00000432862 727 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 MTND1P32-201ENST00000433043 938 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 RPL35AP22-201ENST00000436855 335 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 MTCO3P45-201ENST00000443036 613 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 RPL23AP7-203ENST00000449021 469 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC108938.1-201ENST00000451204 136 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 RPS3P1-201ENST00000456781 192 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC034222.1-201ENST00000494052 532 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC105252.1-201ENST00000503089 286 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC234781.5-201ENST00000508429 271 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 TPT1P8-201ENST00000510120 555 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC098591.2-201ENST00000510152 315 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC109329.2-201ENST00000519658 482 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 RPL7P20-201ENST00000520308 745 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC013828.2-201ENST00000532487 235 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AL133153.1-201ENST00000557756 303 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 LRRC37A5P-203ENST00000580181 585 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 DPPA3P3-201ENST00000603842 430 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC006023.1-201ENST00000603944 259 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC136601.2-201ENST00000604356 474 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AL160281.1-201ENST00000605307 311 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC072039.2-201ENST00000608883 439 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AP000676.3-201ENST00000623299 569 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 MIR4275-201ENST00000636486 87 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.99□□□□□ -2.09
EXOSC4Q9NPD3 MTND4P16-201ENST00000466108 1367 ntBASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 RNU6-884P-201ENST00000363889 107 ntBASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 MIR19A-201ENST00000384878 82 ntBASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 RN7SKP266-201ENST00000410232 287 ntBASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 AL513331.1-201ENST00000411908 397 ntBASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 RPL21P24-201ENST00000413752 448 ntBASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 SEPT2P1-201ENST00000419651 180 ntBASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.98□□□□□ -2.09
EXOSC4Q9NPD3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms