Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS11Q9H270 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS11Q9H270 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS11Q9H270 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS11Q9H270 AL158163.1-201ENST00000603915 1649 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS11Q9H270 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS11Q9H270 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS11Q9H270 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS11Q9H270 SNORD113-7-201ENST00000363762 77 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RNU5A-8P-201ENST00000364102 114 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RNU6-450P-201ENST00000364654 107 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RNU6-1029P-201ENST00000384109 107 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 MIR548M-201ENST00000408260 86 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RNA5SP36-201ENST00000410197 133 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RNU2-37P-201ENST00000410695 177 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 PPP1R11P2-201ENST00000423543 382 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RPL23AP38-201ENST00000423801 469 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RAC1P6-201ENST00000423911 575 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RSL24D1P6-201ENST00000426934 401 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 HMGB1P9-201ENST00000429856 646 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 MTCO3P45-201ENST00000443036 613 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 AC073264.2-201ENST00000448886 166 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 AC092451.1-201ENST00000480211 153 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS11Q9H270 RPL31P61-201ENST00000496160 376 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS11Q9H270 MTND1P19-201ENST00000511780 315 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RNU6-789P-201ENST00000517105 102 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS11Q9H270 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS11Q9H270 AP006289.1-201ENST00000538089 277 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 AP000763.2-201ENST00000540641 163 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS11Q9H270 MIR4703-201ENST00000577728 79 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 MIR4644-201ENST00000579929 84 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 AC138761.3-201ENST00000579993 334 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS11Q9H270 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS11Q9H270 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.18□□□□□ -1.74
VPS11Q9H270 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS11Q9H270 ATP1B3P1-201ENST00000605365 821 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 uc_338.12-201ENST00000616344 181 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 uc_338.34-201ENST00000617467 174 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS11Q9H270 AL445363.3-201ENST00000623080 671 ntBASIC4.18□□□□□ -1.74
VPS11Q9H270 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS11Q9H270 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS11Q9H270 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS11Q9H270 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS11Q9H270 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS11Q9H270 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS11Q9H270 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS11Q9H270 FAM35DP-201ENST00000323387 2712 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
VPS11Q9H270 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VPS11Q9H270 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS11Q9H270 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
VPS11Q9H270 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
VPS11Q9H270 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VPS11Q9H270 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS11Q9H270 HSPE1P11-201ENST00000339579 310 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS11Q9H270 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS11Q9H270 RNU6-76P-201ENST00000384060 104 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 MIR558-201ENST00000384920 94 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS11Q9H270 HSPE1P26-201ENST00000405341 275 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 RNU2-29P-201ENST00000410423 189 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS11Q9H270 ARL5AP1-201ENST00000418991 388 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AL139396.1-201ENST00000421137 167 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AL356387.2-201ENST00000422272 243 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AL157831.1-201ENST00000426134 473 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 OR2AS1P-201ENST00000427827 319 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS11Q9H270 RPS11P1-201ENST00000451072 473 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AC108059.3-201ENST00000456388 214 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS11Q9H270 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS11Q9H270 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS11Q9H270 AC020893.1-201ENST00000502452 580 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AC079140.5-201ENST00000507882 310 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
VPS11Q9H270 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS11Q9H270 RNU6-699P-201ENST00000517081 110 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.17□□□□□ -1.74
VPS11Q9H270 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
VPS11Q9H270 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS11Q9H270 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS11Q9H270 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.17□□□□□ -1.74
VPS11Q9H270 AL133153.1-201ENST00000557756 303 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS11Q9H270 AC103710.2-201ENST00000609912 942 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 DUSP12P1-201ENST00000612874 516 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 AC011890.2-201ENST00000613393 294 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 MIR6780A-201ENST00000615089 68 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 RN7SL722P-201ENST00000617780 284 ntBASIC4.17□□□□□ -1.74
VPS11Q9H270 RN7SL565P-201ENST00000618246 284 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms