Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC007742.1-201ENST00000425789 329 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 ELOCP26-201ENST00000436067 329 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 TPT1P14-201ENST00000448018 505 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 AC080013.2-201ENST00000460866 323 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 LARP1BP2-201ENST00000486594 519 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 HSPA8P13-201ENST00000523715 472 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 AP003066.2-201ENST00000529375 555 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 AC013476.2-201ENST00000614456 459 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 AL445493.3-201ENST00000619568 477 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 Y_RNA.224-201ENST00000364308 111 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 MIR7-2-201ENST00000384970 110 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 SNORA67.5-201ENST00000391036 107 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AL645568.3-201ENST00000433683 316 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 VN1R10P-201ENST00000447106 875 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 RNU7-140P-201ENST00000459546 60 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 RNA5SP291-201ENST00000517222 105 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC124283.4-201ENST00000581815 456 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC008749.1-201ENST00000597650 306 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC025165.5-201ENST00000602802 578 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AP003973.1-201ENST00000604639 691 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC004853.1-201ENST00000604902 698 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AL161423.1-201ENST00000613700 262 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AP001486.3-201ENST00000615334 372 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AL596245.1-201ENST00000618994 362 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 AC073592.7-201ENST00000623659 507 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 U6.101-201ENST00000637707 76 ntBASIC2.09□□□□□ -2.07
UPF3BQ9BZI7 RNU6-492P-201ENST00000363035 104 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 RNU6-1066P-201ENST00000363573 105 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 U8.10-201ENST00000384260 133 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 RNU6-575P-201ENST00000411326 105 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC023141.4-201ENST00000412031 328 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 ZNF863P-201ENST00000426746 417 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 ZFAND6P1-201ENST00000434138 605 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 RPS15AP5-201ENST00000436276 388 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC107393.1-201ENST00000512403 346 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC022784.5-201ENST00000522241 437 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC010186.2-204ENST00000537668 439 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC024614.2-201ENST00000577584 372 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AC004067.1-201ENST00000608733 700 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 FTX_3.1-201ENST00000610451 147 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 AL162373.1-201ENST00000620433 407 ntBASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
UPF3BQ9BZI7 RNU6-353P-201ENST00000364266 108 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AL590233.1-201ENST00000430017 456 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 MTCYBP11-201ENST00000447254 1109 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 MTND2P24-201ENST00000453434 806 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 SNORD13-201ENST00000459299 104 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AC140059.1-201ENST00000489238 361 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AL049874.1-201ENST00000489560 388 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 SCARNA3-201ENST00000517097 143 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AP001429.1-201ENST00000602568 530 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AC025588.2-201ENST00000604851 466 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AC068057.2-201ENST00000624047 895 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 AL159972.1-201ENST00000625150 448 ntBASIC2.07□□□□□ -2.08
UPF3BQ9BZI7 RNU6-661P-201ENST00000362409 107 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 RNU6-707P-201ENST00000364647 95 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 RNU6-657P-201ENST00000383904 107 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AL445183.3-201ENST00000414168 502 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 MOB1AP2-201ENST00000446060 614 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AC098591.2-201ENST00000510152 315 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AC104581.2-201ENST00000572227 430 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AC078899.2-201ENST00000595282 212 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AL035411.2-201ENST00000604022 421 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AC007349.4-201ENST00000608114 532 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AL589743.7-201ENST00000612637 233 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 AC012150.2-201ENST00000621300 544 ntBASIC2.06□□□□□ -2.08
UPF3BQ9BZI7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms