Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC008264.1-201ENST00000447612 367 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 SNRPGP6-201ENST00000451124 220 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 RPS4XP2-201ENST00000458402 793 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 RNU6-261P-201ENST00000459506 102 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 RPL7P5-201ENST00000471472 736 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.3□□□□□ -1.88
PKP4Q99569 HMGN1P12-201ENST00000499125 195 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 AC114786.4-201ENST00000508771 728 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.3□□□□□ -1.88
PKP4Q99569 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.3□□□□□ -1.88
PKP4Q99569 AC017037.2-201ENST00000513850 890 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 LRRC34P2-201ENST00000514850 553 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 RN7SKP60-201ENST00000516985 239 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP4Q99569 AC090572.1-201ENST00000519251 160 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 CENPUP1-201ENST00000526649 1202 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP4Q99569 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.3□□□□□ -1.88
PKP4Q99569 RAB11AP2-201ENST00000545905 639 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 HIF1AP1-201ENST00000553642 175 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP4Q99569 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP4Q99569 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP4Q99569 MIR3944-201ENST00000581277 108 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP4Q99569 KC877982.1-201ENST00000602313 470 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 AL035413.2-201ENST00000604801 525 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 RMST_8.1-201ENST00000610287 165 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 uc_338.12-201ENST00000616344 181 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 AC110801.1-201ENST00000623590 212 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 AL159972.1-201ENST00000625150 448 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKP4Q99569 GABRG2-229ENST00000641017 3628 ntBASIC3.3□□□□□ -1.88
PKP4Q99569 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKP4Q99569 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PKP4Q99569 RIOK3P1-201ENST00000418778 1528 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PKP4Q99569 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PKP4Q99569 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PKP4Q99569 RNA5SP50-201ENST00000363731 107 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 Y_RNA.279-201ENST00000364763 95 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.29□□□□□ -1.88
PKP4Q99569 SAR1AP2-201ENST00000392696 594 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC068050.1-201ENST00000394891 380 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AL354719.1-201ENST00000406535 843 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.29□□□□□ -1.88
PKP4Q99569 AL513185.2-201ENST00000425543 193 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AL606489.2-201ENST00000433886 234 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 TIMM9P1-201ENST00000436122 256 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.29□□□□□ -1.88
PKP4Q99569 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.29□□□□□ -1.88
PKP4Q99569 AC079781.2-201ENST00000446424 169 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 TPT1P14-201ENST00000448018 505 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC140076.1-201ENST00000449897 361 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.29□□□□□ -1.88
PKP4Q99569 PMCHL2-203ENST00000457791 237 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 SNORD121B-201ENST00000458838 81 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 RPL23AP67-201ENST00000465341 474 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 RN7SL293P-201ENST00000481765 281 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 FCF1P8-201ENST00000510322 597 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 RNU6-835P-201ENST00000516974 104 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 RNU6-1220P-201ENST00000517126 108 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.29□□□□□ -1.88
PKP4Q99569 AC034105.3-201ENST00000565294 442 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.29□□□□□ -1.88
PKP4Q99569 HMGB1P6-201ENST00000569046 646 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 MIR4444-1-201ENST00000581696 74 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 MIR4444-2-201ENST00000584390 74 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.29□□□□□ -1.88
PKP4Q99569 AL117336.2-201ENST00000602435 335 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AL356055.1-201ENST00000602528 446 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.29□□□□□ -1.88
PKP4Q99569 Z84480.1-201ENST00000605131 311 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 BNIP3P10-201ENST00000605360 577 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 AC002550.2-201ENST00000621246 394 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 MIR4275-201ENST00000636486 87 ntBASIC3.29□□□□□ -1.88
PKP4Q99569 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PKP4Q99569 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PKP4Q99569 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
PKP4Q99569 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PKP4Q99569 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
PKP4Q99569 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKP4Q99569 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.28□□□□□ -1.88
PKP4Q99569 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.28□□□□□ -1.88
PKP4Q99569 RNU6-451P-201ENST00000362921 107 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 RNU5A-8P-201ENST00000364102 114 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 Y_RNA.381-201ENST00000365666 102 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 SNORA69-201ENST00000383895 132 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 MIR7-3-201ENST00000384898 110 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PKP4Q99569 BX323014.1-201ENST00000412876 237 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AL356968.1-201ENST00000416622 474 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.28□□□□□ -1.88
PKP4Q99569 HSPE1P1-201ENST00000421494 318 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.28□□□□□ -1.88
PKP4Q99569 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.28□□□□□ -1.88
PKP4Q99569 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms