Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RNU6-799P-201ENST00000363567 107 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AC106901.1-201ENST00000425086 698 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AL591043.1-201ENST00000432461 424 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AC105252.1-201ENST00000503089 286 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 RNU6-711P-201ENST00000517255 106 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AP003485.1-201ENST00000625093 753 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AC087045.1-201ENST00000605856 382 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 MIR198-201ENST00000637333 62 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AC073055.1-201ENST00000456901 1621 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 RNA5SP118-201ENST00000410385 109 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 PTENP1-201ENST00000447117 1215 ntBASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD1Q96PZ7 CBX3P1-201ENST00000325243 554 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 LDHBP3-201ENST00000514909 822 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AC008269.2-201ENST00000561915 1105 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AC108676.2-201ENST00000605225 163 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AC135178.6-201ENST00000605314 398 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AL137003.2-201ENST00000606924 2538 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AC021646.1-201ENST00000605469 484 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AC245884.12-201ENST00000615364 59 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AL118508.4-201ENST00000624142 1176 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 Y_RNA.288-201ENST00000364854 92 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 RNU6-1320P-201ENST00000390838 107 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 RNU6-1269P-201ENST00000391139 107 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 RNU6-599P-201ENST00000459383 107 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 RNU6-1193P-201ENST00000459461 107 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 NBEAP1-201ENST00000554452 979 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 RNU6-368P-201ENST00000620928 107 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 RNU6-538P-201ENST00000622329 107 ntBASIC0.55□□□□□ -2.32
CSMD1Q96PZ7 Y_RNA.413-201ENST00000384007 102 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 Y_RNA.559-201ENST00000384686 107 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 AL356776.1-201ENST00000406574 447 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 PMCHL2-203ENST00000457791 237 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 Y_RNA.754-201ENST00000476024 102 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 RNU6-1334P-201ENST00000516032 105 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 AL161734.1-201ENST00000609720 557 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 Y_RNA.790-201ENST00000614282 102 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 Y_RNA.782-201ENST00000614695 102 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 AC006249.1-201ENST00000621223 471 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 MTND4LP12-201ENST00000448237 295 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 CYCSP2-201ENST00000558168 301 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 MIR6718-201ENST00000616153 80 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 AC008555.8-201ENST00000623602 2168 ntBASIC0.54□□□□□ -2.32
CSMD1Q96PZ7 CISD1P1-201ENST00000393907 327 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 SNORD23.1-201ENST00000408212 104 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 SNORD56-201ENST00000413522 71 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 U4.2-201ENST00000618561 85 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 AC009296.1-201ENST00000443146 155 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 SSXP4-201ENST00000451349 245 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 snoU13.11-201ENST00000459219 104 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 AC135999.1-201ENST00000478962 479 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 SNORA3.4-201ENST00000515969 96 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 AP001486.3-201ENST00000615334 372 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 AC096533.1-201ENST00000411645 353 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 AC025768.1-201ENST00000510057 267 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 AC109809.1-201ENST00000619665 545 ntBASIC0.53□□□□□ -2.32
CSMD1Q96PZ7 HAUS6P2-201ENST00000433254 2404 ntBASIC0.53□□□□□ -2.33
CSMD1Q96PZ7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 AC097499.1-201ENST00000444277 208 ntBASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 SDR42E1P2-201ENST00000614861 481 ntBASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 SDR42E1P4-201ENST00000620894 481 ntBASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 AL589743.1-201ENST00000551932 2712 ntBASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 RNU6-1181P-201ENST00000384191 106 ntBASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 SFR1P1-201ENST00000403720 688 ntBASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 VN1R42P-201ENST00000424651 344 ntBASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 RNA5SP57-201ENST00000459463 123 ntBASIC0.52□□□□□ -2.33
CSMD1Q96PZ7 HMGB1P46-201ENST00000520062 610 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms