Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MTND4P23-201ENST00000447723 1363 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 RNU6-657P-201ENST00000383904 107 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 SNORA40.19-201ENST00000390846 128 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 UBE2V1P2-201ENST00000397758 440 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AL139098.1-201ENST00000407291 389 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 BX510359.4-201ENST00000423750 193 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AC007919.1-201ENST00000429380 217 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 RSU1P2-202ENST00000437884 485 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 HMGN2P23-201ENST00000456759 269 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 RNU6-362P-201ENST00000516736 90 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AC095057.3-201ENST00000567102 1157 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 MIR4648-201ENST00000580107 72 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 uc_338.14-201ENST00000613162 166 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.14□□□□□ -2.23
AP1S3Q96PC3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.14□□□□□ -2.23
AP1S3Q96PC3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.13□□□□□ -2.23
AP1S3Q96PC3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC131280.1-202ENST00000624067 4211 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
AP1S3Q96PC3 Y_RNA.548-201ENST00000384656 105 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 MIR95-201ENST00000385072 81 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 MIR320A-201ENST00000385302 82 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 RSL24D1P4-201ENST00000400938 484 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC074117.2-201ENST00000417130 397 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.13□□□□□ -2.23
AP1S3Q96PC3 ZYG11AP1-201ENST00000430329 837 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC092393.1-201ENST00000439625 742 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC118469.1-201ENST00000442943 488 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AL050341.1-201ENST00000447743 313 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 USP9YP10-201ENST00000454868 628 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 MTND2P6-201ENST00000455337 1030 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC005410.1-202ENST00000460347 485 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC018868.1-201ENST00000491307 315 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC093752.1-206ENST00000511823 336 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 RNA5SP112-201ENST00000515937 99 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 RNU1-103P-201ENST00000516502 125 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.13□□□□□ -2.23
AP1S3Q96PC3 EEF1A1P37-201ENST00000522748 715 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AP004607.1-201ENST00000524456 203 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC012414.2-201ENST00000559474 187 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC005951.2-201ENST00000576282 495 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AC104820.1-201ENST00000624183 307 ntBASIC1.13□□□□□ -2.23
AP1S3Q96PC3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.13□□□□□ -2.23
AP1S3Q96PC3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 MIR424-201ENST00000362227 98 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 RNU6-582P-201ENST00000362989 107 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 U8.2-201ENST00000363156 134 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 SNORD26-201ENST00000384147 75 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 MIR1283-2-201ENST00000408621 87 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 AL136133.1-201ENST00000413694 376 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 AC009310.1-201ENST00000414414 451 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 RPL30P13-201ENST00000418873 348 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 FAM204CP-201ENST00000424489 642 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 SKA2P1-201ENST00000425592 390 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 RAC1P8-201ENST00000427086 527 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 AL121578.1-201ENST00000428051 892 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 VN1R108P-201ENST00000431580 830 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 ZNF965P-201ENST00000432501 817 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 PTENP1-201ENST00000447117 1215 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 RPL23AP23-201ENST00000452590 471 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 FAM206BP-201ENST00000510179 541 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 RNU6-885P-201ENST00000516607 104 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 RNU6-250P-201ENST00000516958 103 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 SNORD19.2-201ENST00000516978 73 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 AC034114.1-201ENST00000520293 285 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 DUXAP5-201ENST00000529668 529 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 NIFKP8-201ENST00000560500 874 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 DUXAP11-201ENST00000603858 526 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 AL118508.4-201ENST00000624142 1176 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 U2.21-201ENST00000637295 81 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 AC006026.1-201ENST00000444025 1803 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 ZNF849P-201ENST00000594711 1566 ntBASIC1.12□□□□□ -2.23
AP1S3Q96PC3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
AP1S3Q96PC3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms