Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL670379.1-201ENST00000604752 252 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.2-201ENST00000604983 252 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AC019159.1-201ENST00000605094 187 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.5-201ENST00000605253 252 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.4-201ENST00000605279 254 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.12-201ENST00000605291 253 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL136363.1-201ENST00000605349 337 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.8-201ENST00000605353 252 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.9-201ENST00000605428 253 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.7-201ENST00000605823 252 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USP47Q96K76 AL445264.1-201ENST00000621719 171 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.49□□□□□ -2.01
USP47Q96K76 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
USP47Q96K76 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.49□□□□□ -2.01
USP47Q96K76 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
USP47Q96K76 AC008669.1-201ENST00000565823 2178 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 AC007785.2-201ENST00000598627 1916 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
USP47Q96K76 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 MIR337-201ENST00000362281 93 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 SNORD56.5-201ENST00000364281 72 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 U8.10-201ENST00000384260 133 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 RNU6-193P-201ENST00000410977 107 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.48□□□□□ -2.01
USP47Q96K76 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.48□□□□□ -2.01
USP47Q96K76 RPL23AP76-201ENST00000441860 458 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 AC002381.1-201ENST00000447049 280 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 AC026241.1-201ENST00000517873 2142 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.48□□□□□ -2.01
USP47Q96K76 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.48□□□□□ -2.01
USP47Q96K76 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.48□□□□□ -2.01
USP47Q96K76 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.48□□□□□ -2.01
USP47Q96K76 MIR4446-201ENST00000578505 67 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.48□□□□□ -2.01
USP47Q96K76 AC004987.4-201ENST00000603383 338 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USP47Q96K76 AL159972.1-201ENST00000625150 448 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 AC106858.1-201ENST00000637497 429 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.48□□□□□ -2.01
USP47Q96K76 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USP47Q96K76 RNU6-661P-201ENST00000362409 107 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 RNU6-1078P-201ENST00000364522 103 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 AL627390.1-201ENST00000396055 340 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.47□□□□□ -2.01
USP47Q96K76 RNF2P1-201ENST00000442955 1010 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.47□□□□□ -2.01
USP47Q96K76 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.47□□□□□ -2.01
USP47Q96K76 RNU7-23P-201ENST00000459465 62 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 RPL31P41-201ENST00000477967 372 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 AC104982.1-201ENST00000478775 574 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 SEM1P1-201ENST00000506694 209 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 OR5BM1P-201ENST00000512021 366 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 RNU6-250P-201ENST00000516958 103 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.47□□□□□ -2.01
USP47Q96K76 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.47□□□□□ -2.01
USP47Q96K76 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.47□□□□□ -2.01
USP47Q96K76 OR6C7P-201ENST00000547875 934 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 AL512347.1-201ENST00000566420 503 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 AC010546.1-201ENST00000569391 485 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 MIR4419B-201ENST00000577260 68 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 BNIP3P26-201ENST00000600827 554 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 MIR8070-201ENST00000616510 88 ntBASIC2.47□□□□□ -2.01
USP47Q96K76 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.47□□□□□ -2.01
USP47Q96K76 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USP47Q96K76 SDAD1P2-201ENST00000441308 2028 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 RNU6-97P-201ENST00000363387 104 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 SNORD48-201ENST00000364953 64 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 RNU6-637P-201ENST00000384050 107 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 Y_RNA.472-201ENST00000384322 102 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 RNU6-1207P-201ENST00000384343 107 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 SNORD116-12-201ENST00000384468 92 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 AC092047.1-201ENST00000424997 240 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 MTND5P14-201ENST00000441481 1267 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 MTCYBP3-201ENST00000445588 1137 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USP47Q96K76 RNU6-150P-201ENST00000516237 95 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 BNIP3P27-201ENST00000599991 412 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 AC103710.4-201ENST00000609301 899 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 AC092574.1-201ENST00000609771 420 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 AL138478.1-201ENST00000612252 832 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 AC093838.1-201ENST00000613014 469 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 FO624990.1-201ENST00000636373 85 ntBASIC2.46□□□□□ -2.02
USP47Q96K76 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.45□□□□□ -2.02
USP47Q96K76 ZNF519P1-201ENST00000449011 1626 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USP47Q96K76 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
USP47Q96K76 MIR627-201ENST00000384979 97 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 MIR767-201ENST00000390228 109 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 AL356057.2-201ENST00000403318 432 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 BX682237.1-201ENST00000415016 335 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 AL049734.2-201ENST00000441066 616 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 BMI1P1-201ENST00000445879 941 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 RPS20P20-201ENST00000460498 340 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.45□□□□□ -2.02
USP47Q96K76 AC025755.1-201ENST00000521306 278 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 DEFB131D-201ENST00000526803 184 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.45□□□□□ -2.02
USP47Q96K76 AC005951.2-201ENST00000576282 495 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms