Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 RAB9AP1-201ENST00000449393 573 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 AC010618.1-201ENST00000469924 477 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 PPP1R11P1-201ENST00000486095 376 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 IGKV1-32-201ENST00000519290 311 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 AC090049.2-201ENST00000550377 109 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 AC060780.2-201ENST00000589047 198 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 AL161798.1-201ENST00000604630 131 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.7□□□□□ -1.5
LRCH3Q96II8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRCH3Q96II8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRCH3Q96II8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRCH3Q96II8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
LRCH3Q96II8 CUL1P1-201ENST00000509510 2425 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRCH3Q96II8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 RNU5E-7P-201ENST00000365290 117 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 Y_RNA.337-201ENST00000365312 102 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 Y_RNA.369-201ENST00000365568 117 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 SNORD37.2-201ENST00000391075 66 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 RNA5SP113-201ENST00000410486 84 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 AL513331.1-201ENST00000411908 397 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 RN7SL189P-201ENST00000468631 289 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 AC092991.1-201ENST00000477176 376 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 RN7SKP164-201ENST00000516138 266 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 CYCSP29-201ENST00000533731 318 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 AL358913.1-201ENST00000554342 121 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 HMGN2P47-201ENST00000559378 272 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 AC006115.2-201ENST00000596823 202 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 AC123786.2-201ENST00000603459 275 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 AC069294.1-201ENST00000608397 350 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 AC048347.1-201ENST00000624621 427 ntBASIC5.69□□□□□ -1.5
LRCH3Q96II8 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRCH3Q96II8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRCH3Q96II8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.69□□□□□ -1.5
LRCH3Q96II8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRCH3Q96II8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRCH3Q96II8 AC114774.1-201ENST00000507410 1770 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 SRP72P2-201ENST00000344851 1979 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 AC010329.2-201ENST00000595195 2737 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRCH3Q96II8 MIR670-201ENST00000390142 98 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 GPS2P1-201ENST00000411761 986 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 CYCSP10-201ENST00000417973 294 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 AC063976.4-201ENST00000421971 163 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 AC007161.1-204ENST00000423039 460 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 AL732292.1-201ENST00000426692 226 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 Y_RNA.637-201ENST00000459424 114 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 AL121594.1-201ENST00000475906 575 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 TRAV28-201ENST00000557548 323 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 MIR6716-201ENST00000613413 80 ntBASIC5.68□□□□□ -1.5
LRCH3Q96II8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRCH3Q96II8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRCH3Q96II8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRCH3Q96II8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRCH3Q96II8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
LRCH3Q96II8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 Y_RNA.319-201ENST00000365138 92 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 RNA5SP44-201ENST00000410446 133 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 RN7SKP100-201ENST00000411258 284 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms