Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC002075.2-201ENST00000425207 252 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 ELOCP23-201ENST00000452014 332 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 RPS29P25-201ENST00000481709 171 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 AC069439.1-201ENST00000494739 167 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 EIF4EP3-201ENST00000498782 656 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.98□□□□□ -1.77
HPS3Q969F9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.98□□□□□ -1.77
HPS3Q969F9 APOOP4-201ENST00000513530 597 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HPS3Q969F9 AC118273.2-201ENST00000532092 465 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.98□□□□□ -1.77
HPS3Q969F9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.98□□□□□ -1.77
HPS3Q969F9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.98□□□□□ -1.77
HPS3Q969F9 MIR4738-201ENST00000579134 87 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 MIR5047-201ENST00000579212 100 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.98□□□□□ -1.77
HPS3Q969F9 AC098826.3-201ENST00000603823 466 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 AL110115.1-201ENST00000614396 364 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 U6.42-201ENST00000618440 107 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 U4.6-201ENST00000621618 127 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
HPS3Q969F9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.98□□□□□ -1.77
HPS3Q969F9 AC024614.3-201ENST00000637860 256 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HPS3Q969F9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HPS3Q969F9 AC005183.1-201ENST00000603687 1979 ntBASIC3.98□□□□□ -1.77
HPS3Q969F9 AF127577.6-201ENST00000623352 2191 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 ASNSP3-201ENST00000451989 1306 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 AL354685.2-201ENST00000448218 1447 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 ZNF285B-201ENST00000561698 1767 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HPS3Q969F9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HPS3Q969F9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HPS3Q969F9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HPS3Q969F9 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.97□□□□□ -1.77
HPS3Q969F9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HPS3Q969F9 RNU6-550P-201ENST00000391057 101 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 CISD1P1-201ENST00000393907 327 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.97□□□□□ -1.77
HPS3Q969F9 YPEL5P1-201ENST00000419731 367 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 ARF4P2-201ENST00000430209 526 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 RPL23AP83-201ENST00000434984 473 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.97□□□□□ -1.77
HPS3Q969F9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.97□□□□□ -1.77
HPS3Q969F9 RPS29P31-201ENST00000446147 164 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 RPL23AP11-201ENST00000475260 469 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 RPL30P5-201ENST00000494923 336 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HPS3Q969F9 RN7SKP13-201ENST00000515933 244 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 AF235103.2-201ENST00000525753 346 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.97□□□□□ -1.77
HPS3Q969F9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.97□□□□□ -1.77
HPS3Q969F9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.97□□□□□ -1.77
HPS3Q969F9 AC015917.1-201ENST00000579654 510 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 MIR548S-201ENST00000581352 82 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.97□□□□□ -1.77
HPS3Q969F9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HPS3Q969F9 AC010338.1-201ENST00000621823 717 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 AC039056.2-201ENST00000622261 511 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.97□□□□□ -1.77
HPS3Q969F9 MTND1P37-201ENST00000636562 264 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 U6.98-201ENST00000637157 84 ntBASIC3.97□□□□□ -1.77
HPS3Q969F9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HPS3Q969F9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HPS3Q969F9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.97□□□□□ -1.77
HPS3Q969F9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.77
HPS3Q969F9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS3Q969F9 OR4G1P-203ENST00000641984 1631 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AC007785.2-201ENST00000598627 1916 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HPS3Q969F9 Y_RNA.245-201ENST00000364493 95 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS3Q969F9 U3.42-201ENST00000408746 214 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.96□□□□□ -1.78
HPS3Q969F9 RNU2-33P-201ENST00000410344 192 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 RAB9AP3-201ENST00000412737 573 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 TMEM167AP1-201ENST00000423409 219 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AL591704.1-201ENST00000432574 275 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 NDUFB4P6-201ENST00000436819 366 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 SETP5-201ENST00000437270 562 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 MTATP6P23-201ENST00000440153 476 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 PIGFP3-201ENST00000441918 722 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AC104058.1-201ENST00000448028 297 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 RAB9AP1-201ENST00000449393 573 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS3Q969F9 AC091885.1-201ENST00000506658 268 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 TTC39CP1-201ENST00000512513 755 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AC074344.1-201ENST00000512823 224 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 RNA5SP290-201ENST00000517133 127 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AP006245.1-201ENST00000522549 120 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 MTND4P7-201ENST00000523876 130 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 SUB1P1-201ENST00000524415 382 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.96□□□□□ -1.78
HPS3Q969F9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.96□□□□□ -1.78
HPS3Q969F9 TRAV28-201ENST00000557548 323 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AC060780.3-201ENST00000589464 80 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS3Q969F9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AL357559.1-201ENST00000622228 274 ntBASIC3.96□□□□□ -1.78
HPS3Q969F9 AC009033.1-201ENST00000624279 431 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms