Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC024589.1-201ENST00000512207 263 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC107393.1-201ENST00000512403 346 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 SETP2-201ENST00000553886 926 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 MIR4452-201ENST00000583004 71 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL355812.1-201ENST00000603215 216 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AL390208.1-201ENST00000605885 644 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC080013.4-201ENST00000607624 649 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 MIR6779-201ENST00000617283 64 ntBASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHROOM3Q8TF72 DDX43P2-201ENST00000604753 1354 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 AC002546.1-201ENST00000588041 2504 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 AL139276.1-201ENST00000311910 1001 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 RNU6-989P-201ENST00000362756 107 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 U8.10-201ENST00000384260 133 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 RNU6-339P-201ENST00000384310 107 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 RNU6-952P-201ENST00000391164 108 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 SNRPEP2-201ENST00000397592 279 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 MTND1P32-201ENST00000433043 938 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 MTND3P7-201ENST00000474435 343 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 COX7A2P2-201ENST00000505291 250 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 AC010486.2-201ENST00000505572 483 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 MTCYBP41-201ENST00000528913 1123 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 TUSC7.1-201ENST00000610969 165 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 MIR6515-201ENST00000619843 57 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 AC026241.1-201ENST00000517873 2142 ntBASIC1.93□□□□□ -2.1
SHROOM3Q8TF72 RNA5SP325-201ENST00000363756 130 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 RNU6-723P-201ENST00000383973 107 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 U3.29-201ENST00000391296 212 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 SSXP9-201ENST00000417503 292 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AL139421.1-201ENST00000423010 169 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 PAXBP1P1-201ENST00000449315 447 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AL021397.1-201ENST00000451806 248 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 FABP5P13-201ENST00000452144 328 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 TMEM251P1-201ENST00000503717 318 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 RNA5SP468-201ENST00000516782 93 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 LRRC34P1-201ENST00000542742 915 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AL031176.1-201ENST00000604554 466 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC025588.2-201ENST00000604851 466 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC008083.4-201ENST00000615076 444 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC090617.7-201ENST00000623952 126 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AL022578.1-201ENST00000439330 1433 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AL079343.1-201ENST00000572358 1771 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC011477.1-204ENST00000623416 1325 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC087359.1-201ENST00000508335 1740 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 RNU6-335P-201ENST00000364563 113 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 Y_RNA.548-201ENST00000384656 105 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 MIR1323-201ENST00000408090 73 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 RNA5SP492-201ENST00000411330 114 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 USP9YP26-201ENST00000421008 661 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC092473.1-201ENST00000441098 221 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 Z82190.1-201ENST00000454534 490 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 RNU7-59P-201ENST00000459101 61 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 RPS26P21-201ENST00000475397 348 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 RPL7P18-201ENST00000478965 734 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 RPL23AP55-201ENST00000498163 452 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC098862.1-201ENST00000504991 413 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 MLLT10P2-201ENST00000506434 249 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 ARL4AP2-201ENST00000507378 601 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC026407.1-201ENST00000518369 204 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 OR6C7P-201ENST00000547875 934 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 CYCSP2-201ENST00000558168 301 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 XIAPP1-201ENST00000603162 600 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 DPRXP5-201ENST00000604662 539 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AC019159.1-201ENST00000605094 187 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 BX248123.2-201ENST00000606318 124 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AL139418.1-201ENST00000613613 177 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 RMST_2.1-201ENST00000617263 136 ntBASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms