Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NIPA2P5-201ENST00000452282 464 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 CECR9-201ENST00000453421 199 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AP000705.1-201ENST00000454567 350 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC027673.1-201ENST00000456245 405 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC073901.1-201ENST00000462471 408 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 RN7SL542P-201ENST00000467147 294 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC117522.3-201ENST00000507974 584 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 Y_RNA.695-201ENST00000516715 107 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 RNA5SP290-201ENST00000517133 127 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC090616.3-201ENST00000582184 217 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC009977.1-201ENST00000586015 570 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 HMGN1P30-201ENST00000589286 268 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 NRBF2P5-201ENST00000603087 788 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC136601.2-201ENST00000604356 474 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AP000860.1-201ENST00000605250 559 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 RNU6-87P-201ENST00000607561 108 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC138749.5-201ENST00000611461 208 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC008250.2-201ENST00000615261 205 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AL158063.1-201ENST00000615349 536 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC116165.2-201ENST00000616705 206 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC092140.2-201ENST00000618027 521 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC039056.2-201ENST00000622261 511 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC012442.3-202ENST00000636742 206 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 SNORA63.1-201ENST00000362493 131 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 SNORA40.3-201ENST00000390964 122 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 MRPL42P2-201ENST00000403169 426 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AL139397.2-201ENST00000404529 772 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AL359634.1-202ENST00000404721 284 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AC007064.1-201ENST00000412238 351 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AC022018.1-201ENST00000430685 241 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 RPS20P5-201ENST00000434808 360 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 RPS20P22-201ENST00000473700 357 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AC090525.1-201ENST00000479116 478 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 MTND1P3-201ENST00000484956 952 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 SUMO2P6-201ENST00000505273 288 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 ATP5F1P5-201ENST00000526403 760 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 OR4R1P-201ENST00000529879 463 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AP003122.4-201ENST00000530980 758 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 RPL21P5-201ENST00000554662 472 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AL391261.3-201ENST00000557194 520 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 MIR4429-201ENST00000580105 73 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 MIR3944-201ENST00000581277 108 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AC060766.3-201ENST00000591442 263 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 UCA1.1-201ENST00000620952 75 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AC092104.1-201ENST00000497346 1441 ntBASIC2.31□□□□□ -2.04
CCDC71LQ8N9Z2 AC000403.1-201ENST00000613696 3585 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AL359693.1-201ENST00000614959 2407 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 FGF7P2-201ENST00000332473 296 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 RNU6-512P-201ENST00000364438 103 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 RNU6-701P-201ENST00000384059 107 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 SNORA54-201ENST00000384281 123 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 SNORD116-1-201ENST00000384335 95 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 RNU2-62P-201ENST00000410868 191 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 HMGN1P14-201ENST00000412459 517 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC006366.1-201ENST00000422002 759 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC019097.1-201ENST00000424783 735 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AL589872.1-201ENST00000426602 288 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AL451062.2-201ENST00000427515 271 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC119618.1-201ENST00000434191 222 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 TAF9P1-201ENST00000445421 515 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AL671855.1-201ENST00000446875 1203 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 WASF1P1-201ENST00000447560 1131 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 TAF9P2-201ENST00000454958 515 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms