Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC138393.1-203ENST00000327086 343 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 MIR3074-201ENST00000384885 81 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 VN1R36P-201ENST00000414936 291 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC007390.1-201ENST00000415722 356 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 RPL7P10-201ENST00000417407 739 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 PGBD4P6-201ENST00000421501 610 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC092047.1-201ENST00000424997 240 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC092001.1-201ENST00000453012 261 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 MIR892C-201ENST00000516410 77 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 CYCSP27-201ENST00000527643 293 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AP000889.2-201ENST00000532684 490 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC025423.5-201ENST00000550230 219 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 MIR4795-201ENST00000584182 89 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC087045.1-201ENST00000605856 382 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 SNORA51-201ENST00000606420 132 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AL132765.2-201ENST00000610812 351 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AL354798.1-201ENST00000622505 329 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 AC007256.1-201ENST00000392253 2765 ntBASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SYNPOQ8N3V7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
SYNPOQ8N3V7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
SYNPOQ8N3V7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AL359693.1-201ENST00000614959 2407 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 MIR412-201ENST00000362142 91 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 SNORD46.1-201ENST00000364139 104 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 SNORA75B-201ENST00000384053 137 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 MIR7-3-201ENST00000384898 110 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AL356057.2-201ENST00000403318 432 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AL500522.2-201ENST00000448562 343 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 MTND4P17-201ENST00000470444 350 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 RPL30P14-201ENST00000482744 348 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AF213884.1-201ENST00000488102 463 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AC009902.1-201ENST00000519351 183 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 MTCO3P23-201ENST00000561363 289 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AC120057.2-201ENST00000571520 271 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AC022655.2-201ENST00000577280 318 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 MIR4790-201ENST00000577799 79 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 RNU6-85P-201ENST00000605989 107 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AC073308.1-201ENST00000623696 305 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 AC012442.3-202ENST00000636742 206 ntBASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SYNPOQ8N3V7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 RNU6-213P-201ENST00000384051 104 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 RNU6-658P-201ENST00000384606 106 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AL353621.1-201ENST00000418219 243 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 NCOR1P3-201ENST00000420479 303 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 HMGB1P9-201ENST00000429856 646 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AL158071.1-201ENST00000430315 461 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AL445584.1-201ENST00000431451 330 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 PPIAP15-201ENST00000479662 484 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AC079140.5-201ENST00000507882 310 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 RPL39P5-202ENST00000512505 151 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 RNU1-86P-201ENST00000516108 154 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 RNU6-1069P-201ENST00000516612 133 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 RNU1-107P-201ENST00000516617 154 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 RNU6-1088P-201ENST00000516850 104 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 IGKV2-23-201ENST00000518729 323 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AC093027.1-201ENST00000546698 429 ntBASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNPOQ8N3V7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms