Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 SRP72P2-201ENST00000344851 1979 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 Y_RNA.16-201ENST00000362421 102 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 SNORD113-8-201ENST00000363497 74 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 SNORA58B-201ENST00000364259 136 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 RNA5SP500-201ENST00000364486 119 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 Y_RNA.269-201ENST00000364685 89 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 PPIAP31-201ENST00000405422 495 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AC007161.1-204ENST00000423039 460 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 RPL21P66-201ENST00000426566 466 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AC016700.2-201ENST00000446011 156 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AL353705.4-201ENST00000449661 238 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AL450023.1-201ENST00000450868 751 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AURKAPS2-201ENST00000454983 333 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AC022133.1-201ENST00000490961 571 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 SERF1AP1-201ENST00000514575 187 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 Vault.1-201ENST00000516474 102 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 MRPS36P4-201ENST00000534436 298 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AC107016.1-201ENST00000550463 337 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 ZNF826P-207ENST00000622273 1910 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 RNU4-90P-201ENST00000362773 141 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-942P-201ENST00000363002 107 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 RNA5SP443-201ENST00000363083 132 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-290P-201ENST00000365212 101 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-886P-201ENST00000384319 105 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 MIR153-2-201ENST00000385225 87 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 MIR1298-201ENST00000408783 112 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-1245P-201ENST00000411130 106 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 EIF1P2-201ENST00000428233 350 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 EEF1B2P6-201ENST00000445713 673 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AC092647.2-201ENST00000452998 253 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 RN7SL610P-201ENST00000463845 291 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 RN7SL583P-201ENST00000475692 287 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AC023824.2-201ENST00000566185 400 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AC120057.2-201ENST00000571520 271 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 MIR4700-201ENST00000578311 74 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AL589674.2-201ENST00000604304 337 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 AC073869.10-201ENST00000642016 354 ntBASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
DEPDC4Q8N2C3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 AP001642.1-201ENST00000624727 2117 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 FTLP6-201ENST00000355274 422 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 RNU1-108P-201ENST00000362556 161 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 MIR607-201ENST00000385241 96 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 OR3A2-201ENST00000408891 1076 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 AC007738.1-201ENST00000413892 348 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 RPS23P1-201ENST00000491662 432 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 RN7SL466P-201ENST00000497546 295 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-1114P-201ENST00000516022 107 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 RNA5SP362-201ENST00000516048 118 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 RNU1-103P-201ENST00000516502 125 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 AP006245.2-201ENST00000522004 300 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 AP000769.2-201ENST00000602344 396 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 SUMO2P15-201ENST00000604285 278 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 AC073657.2-201ENST00000605661 303 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 AC244107.2-201ENST00000611773 76 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 AC127459.3-201ENST00000624328 466 ntBASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms