Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 BX510359.3-201ENST00000422168 306 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AC007560.1-201ENST00000426912 237 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AL627311.1-201ENST00000431514 115 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 NDUFA5P4-201ENST00000436704 385 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 SETP5-201ENST00000437270 562 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 MTATP6P7-201ENST00000453315 681 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AL583843.1-201ENST00000456070 346 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 RN7SL812P-201ENST00000493791 279 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 MIR892C-201ENST00000516410 77 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 RNU1-103P-201ENST00000516502 125 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 RNU6-703P-201ENST00000516946 107 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AC087369.1-201ENST00000520775 996 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AC243972.3-201ENST00000539655 198 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 H3F3AP1-201ENST00000559984 334 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 MIR4474-201ENST00000579189 78 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AL645944.1-201ENST00000603857 493 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AC063943.3-201ENST00000615562 356 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 MIR7155-201ENST00000615925 56 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AC090510.2-201ENST00000617465 629 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 U6.99-201ENST00000637524 83 ntBASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC28AQ8IWP9 MTND4P12-201ENST00000498999 1377 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RNU6-845P-201ENST00000362578 103 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RNU6-778P-201ENST00000363269 103 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 Y_RNA.166-201ENST00000363730 102 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RNU6-266P-201ENST00000364225 107 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RNU1-73P-201ENST00000383971 164 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 Y_RNA.414-201ENST00000384011 101 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AL022722.2-201ENST00000402519 180 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RNU2-3P-201ENST00000410144 191 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RNA5SP113-201ENST00000410486 84 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 NDUFS5P4-201ENST00000412983 318 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AL139095.3-201ENST00000419672 1203 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AL353729.1-201ENST00000425044 720 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC007389.2-201ENST00000434630 306 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 IFNA20P-201ENST00000436840 528 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AL772161.1-201ENST00000439130 476 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 USP9YP8-201ENST00000441913 500 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC012671.1-201ENST00000451912 203 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC092798.1-201ENST00000458542 409 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RNU7-66P-201ENST00000459469 62 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC011005.2-201ENST00000487324 359 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC026801.1-201ENST00000497178 464 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 TRBVA-201ENST00000498804 316 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 TBCAP3-201ENST00000512475 312 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC026726.1-201ENST00000512859 601 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 RN7SKP256-201ENST00000517201 314 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC069113.1-201ENST00000517763 267 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC090136.1-201ENST00000520009 240 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AP000867.2-201ENST00000532468 320 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC104662.1-201ENST00000604448 511 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 CTHRC1P1-201ENST00000605383 469 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC018445.2-201ENST00000622987 260 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC140479.6-201ENST00000633535 357 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AL079305.1-201ENST00000623159 3008 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 AC007256.1-201ENST00000392253 2765 ntBASIC3.39□□□□□ -1.87
CCDC28AQ8IWP9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 MTND5P7-201ENST00000413558 1798 ntBASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 SNORD14B-201ENST00000364533 90 ntBASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 RNU6-166P-201ENST00000384371 107 ntBASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 RNU6-658P-201ENST00000384606 106 ntBASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 AL391417.1-201ENST00000404100 426 ntBASIC3.38□□□□□ -1.87
CCDC28AQ8IWP9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms