Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC020699.1-201ENST00000505161 445 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC004062.1-201ENST00000509926 645 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC108157.1-201ENST00000510511 539 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 RNU2-19P-201ENST00000517288 84 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AP004247.1-201ENST00000531556 1289 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC023050.2-201ENST00000544968 387 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AL158032.1-201ENST00000605401 106 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AL590282.1-201ENST00000610379 1136 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC002550.2-201ENST00000621246 394 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 MIR126-201ENST00000362291 85 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 RNU4-42P-201ENST00000364738 142 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 MT-TP-201ENST00000387461 68 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 SFR1P1-201ENST00000403720 688 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 RNA5SP511-201ENST00000410487 115 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 RNA5SP310-201ENST00000459084 116 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 RNU6-1073P-201ENST00000517182 106 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 EIF4EP5-201ENST00000528228 640 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC087465.1-201ENST00000560574 245 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC090616.3-201ENST00000582184 217 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AL096840.1-201ENST00000603287 93 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC084373.1-201ENST00000603311 235 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC106028.5-201ENST00000610332 395 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC009812.4-201ENST00000569134 1805 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC096656.1-201ENST00000623826 1364 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 NACAP2-201ENST00000318548 624 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 SNRPEP3-201ENST00000338402 276 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 MIR150-201ENST00000385048 84 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 MTND2P9-201ENST00000422293 931 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 PABPC1P3-201ENST00000469174 459 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 RPL30P11-201ENST00000495304 339 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 MIR4287-201ENST00000579398 78 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AC005786.1-201ENST00000588553 154 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 AL161722.3-201ENST00000605789 2983 ntBASIC0.71□□□□□ -2.3
CSPG4Q6UVK1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 RNU6-697P-201ENST00000363348 107 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 RNU4-31P-201ENST00000384211 141 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 RPL7P30-201ENST00000420888 709 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 HMGB3P17-201ENST00000504195 649 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 HMGB1P22-201ENST00000505315 124 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC023141.11-201ENST00000508864 202 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 MRPS33P3-201ENST00000513456 322 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC133963.2-201ENST00000513686 578 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 OR6C7P-201ENST00000547875 934 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 MTCYBP23-201ENST00000558717 1102 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC138473.1-201ENST00000605717 526 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 BX322635.1-201ENST00000605804 496 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC073544.1-201ENST00000600110 1595 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 RNU6-1293P-201ENST00000384077 107 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 RNU6-1197P-201ENST00000391183 107 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC099548.1-201ENST00000421443 426 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC092648.1-201ENST00000425870 423 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC023347.2-201ENST00000433994 462 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 RNF2P1-201ENST00000442955 1010 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 Z77249.1-201ENST00000444622 1175 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC112198.4-201ENST00000515450 351 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AP004371.1-201ENST00000525240 214 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 AC018755.4-201ENST00000619715 454 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 RNU6-156P-201ENST00000621869 107 ntBASIC0.7□□□□□ -2.3
CSPG4Q6UVK1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 AL161651.1-201ENST00000440882 223 ntBASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 snoU13.7-201ENST00000459220 104 ntBASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 RPS20P20-201ENST00000460498 340 ntBASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 SYPL1P1-201ENST00000473622 768 ntBASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 AP005902.1-201ENST00000521358 186 ntBASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 AP003497.1-201ENST00000528472 562 ntBASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 AC012254.4-201ENST00000588843 273 ntBASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.69□□□□□ -2.3
CSPG4Q6UVK1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms