Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 RPL23AP16-201ENST00000441715 421 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 HMGN2P10-201ENST00000448085 265 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 AP002748.2-201ENST00000528671 348 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 AL133241.1-201ENST00000556832 487 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 SUMO2P14-201ENST00000604488 293 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 AC025048.6-202ENST00000627667 438 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 MIR7157-201ENST00000635801 60 ntBASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC171Q6TFL3 RNU6-53P-201ENST00000365367 106 ntBASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 RNU6-1151P-201ENST00000384684 107 ntBASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 AL356131.1-201ENST00000405826 414 ntBASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 AL035410.1-201ENST00000427409 427 ntBASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 AC244505.5-201ENST00000443639 207 ntBASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 Z73417.1-201ENST00000447373 778 ntBASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 AC008834.1-201ENST00000511612 175 ntBASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 AC073413.2-201ENST00000604332 360 ntBASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
CCDC171Q6TFL3 RNU6-1155P-201ENST00000363554 107 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 RNU6-1083P-201ENST00000384022 107 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 FO393414.1-201ENST00000428697 1184 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 TAAR7P-201ENST00000436141 242 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 UBE2V1P5-201ENST00000440070 405 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 RPL12P25-201ENST00000455592 494 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 RNU6-491P-201ENST00000516099 110 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 RN7SKP179-201ENST00000516126 217 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 MTCYBP27-201ENST00000555160 670 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 AC087465.1-201ENST00000560574 245 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 AC024619.4-201ENST00000580924 316 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 KC877982.1-201ENST00000602313 470 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 AC011374.2-201ENST00000607135 526 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 U4atac.1-201ENST00000618345 95 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 AC091895.1-201ENST00000624494 256 ntBASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC171Q6TFL3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 RNU6-882P-201ENST00000391025 103 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AL136133.1-201ENST00000413694 376 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC244453.4-201ENST00000419150 388 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC246680.2-201ENST00000422106 389 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC012497.1-201ENST00000429392 575 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC244035.1-201ENST00000430042 390 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC080013.2-201ENST00000460866 323 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC114786.4-201ENST00000508771 728 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC114797.1-201ENST00000514003 728 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 OR8K4P-201ENST00000534608 872 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AC105224.1-201ENST00000587055 421 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 PRR13P7-201ENST00000605538 430 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AL137246.1-201ENST00000607072 977 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 AP002791.1-201ENST00000623291 381 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 MTND5P31-201ENST00000419366 1374 ntBASIC1.43□□□□□ -2.18
CCDC171Q6TFL3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 AL158823.1-201ENST00000418441 478 ntBASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 AL512844.2-201ENST00000433990 593 ntBASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 AC015724.1-201ENST00000478577 156 ntBASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 RNU5A-7P-201ENST00000515979 116 ntBASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 MIR3199-1-201ENST00000582434 88 ntBASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 AC068057.2-201ENST00000624047 895 ntBASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC171Q6TFL3 MIR649-201ENST00000384843 97 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 AC244636.1-201ENST00000421152 228 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 RAB11AP1-201ENST00000442978 646 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 BMI1P1-201ENST00000445879 941 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 AC068135.1-201ENST00000446164 246 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 AL592447.1-201ENST00000447592 540 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 HMGN3P1-201ENST00000453847 193 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 SCARNA3-201ENST00000517097 143 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms