Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 Y_RNA.100-201ENST00000363141 102 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 SNORD113.2-201ENST00000364166 89 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 SNORD81.2-201ENST00000365153 76 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 Y_RNA.399-201ENST00000383955 105 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 SNORA70F-201ENST00000384142 135 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 RNU6-1009P-201ENST00000390996 107 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 RNA5SP397-201ENST00000391323 118 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 FAR2P2-201ENST00000413041 594 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 RPS15AP6-201ENST00000420703 385 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 ARF4P2-201ENST00000430209 526 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 RPS29P31-201ENST00000446147 164 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC009220.1-201ENST00000451614 275 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AL583843.1-201ENST00000456070 346 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 snoU13.1-201ENST00000459157 104 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 RNU1-86P-201ENST00000516108 154 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 RNU1-107P-201ENST00000516617 154 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC087241.2-201ENST00000535801 324 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 TRAV37-201ENST00000553906 342 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC069061.3-201ENST00000582254 823 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 MIR3942-201ENST00000585264 109 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC091135.1-201ENST00000585943 307 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC068790.4-201ENST00000602474 263 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 HSPE1P7-201ENST00000604681 321 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 FTX_3.1-201ENST00000610451 147 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC103705.1-201ENST00000619013 241 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AL031601.2-202ENST00000622650 282 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AL445363.3-201ENST00000623080 671 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 FAM35BP-202ENST00000497389 3337 ntBASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM88Q6PEY1 LARP1BP1-201ENST00000506036 1359 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 RNU6-884P-201ENST00000363889 107 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 RNU6-270P-201ENST00000364131 105 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 Y_RNA.530-201ENST00000384587 101 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 RNU6-510P-201ENST00000391239 108 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 EIF4E2P1-201ENST00000393781 255 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 RPLP0P7-201ENST00000416050 667 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 HSPE1P1-201ENST00000421494 318 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC005019.1-201ENST00000436455 431 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 PPP1R2P5-201ENST00000457256 603 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 RNU7-66P-201ENST00000459469 62 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC117503.1-201ENST00000472241 394 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC084357.1-201ENST00000473404 255 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 RPL30P14-201ENST00000482744 348 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC008716.1-201ENST00000511084 513 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC008549.1-201ENST00000512900 643 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 SNORA19.2-201ENST00000516013 114 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 RNU6-572P-201ENST00000516724 80 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 SNORA31.19-201ENST00000517079 126 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 RN7SKP256-201ENST00000517201 314 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC090136.1-201ENST00000520009 240 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AP001781.1-201ENST00000530977 207 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 H3F3AP1-201ENST00000559984 334 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 MIR4742-201ENST00000581069 85 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC104662.1-201ENST00000604448 511 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AL592436.1-201ENST00000605135 558 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC021646.1-201ENST00000605469 484 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 BRDTP1-201ENST00000605735 677 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 AC068831.7-201ENST00000616954 363 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 MIR7641-1-201ENST00000627518 61 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 U6.99-201ENST00000637524 83 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms