Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC015917.1-201ENST00000579654 510 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AP000907.4-201ENST00000604143 237 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AL035413.2-201ENST00000604801 525 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC007938.3-201ENST00000604965 623 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 AL445567.2-201ENST00000618935 498 ntBASIC3.8□□□□□ -1.8
PPP4R4Q6NUP7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 NACAP2-201ENST00000318548 624 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-371P-201ENST00000364283 108 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 RNA5SP139-201ENST00000364340 117 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-1027P-201ENST00000383998 107 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-1127P-201ENST00000384580 107 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 MIR578-201ENST00000384828 96 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-193P-201ENST00000410977 107 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AC108032.1-201ENST00000416706 207 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 RSL24D1P6-201ENST00000426934 401 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 MTND1P2-201ENST00000430604 821 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 MRPS10P2-201ENST00000431226 381 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AC114755.5-201ENST00000447760 831 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AC022493.1-201ENST00000492984 337 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 EIF4EP3-201ENST00000498782 656 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 MTND4LP22-201ENST00000508209 276 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AL157871.3-201ENST00000557231 293 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 SNORD39.4-201ENST00000620099 78 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 SRP72P2-201ENST00000344851 1979 ntBASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.79□□□□□ -1.8
PPP4R4Q6NUP7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 Y_RNA.295-201ENST00000364918 102 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 MIR514A2-201ENST00000385131 88 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 MIR514A3-201ENST00000385132 88 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 SAR1AP2-201ENST00000392696 594 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 EI24P2-201ENST00000397776 1076 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 OR9R1P-201ENST00000412200 877 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AC063979.1-201ENST00000415539 377 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 RPL37P4-201ENST00000448908 268 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 RPL21P41-201ENST00000459863 264 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AC103987.1-201ENST00000473394 348 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AP002812.1-201ENST00000495378 474 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AC010265.1-201ENST00000513509 211 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 MIR2116-201ENST00000517221 80 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AL118558.2-201ENST00000556294 238 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AC022655.2-201ENST00000577280 318 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AL020997.2-201ENST00000602607 184 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AL138889.2-201ENST00000603883 242 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 ZYXP1-201ENST00000617638 118 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AC110079.1-202ENST00000635213 138 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AC024614.3-201ENST00000637860 256 ntBASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PPP4R4Q6NUP7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.81
PPP4R4Q6NUP7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 MTND4P35-201ENST00000604257 1375 ntBASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 RNU6-38P-201ENST00000384085 107 ntBASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 RNA5SP111-201ENST00000411386 101 ntBASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 AC068533.1-201ENST00000418542 415 ntBASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 AL645937.1-202ENST00000421799 937 ntBASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 GOT2P5-201ENST00000433995 546 ntBASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 HSFY6P-201ENST00000445573 403 ntBASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 NFU1P2-201ENST00000448700 469 ntBASIC3.77□□□□□ -1.81
PPP4R4Q6NUP7 RPS15AP27-201ENST00000449183 343 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms