Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 MTND1P20-201ENST00000430341 950 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.53□□□□□ -2
ATL3Q6DD88 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.53□□□□□ -2
ATL3Q6DD88 TPT1P14-201ENST00000448018 505 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.53□□□□□ -2
ATL3Q6DD88 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.53□□□□□ -2
ATL3Q6DD88 RPS15AP36-201ENST00000492022 382 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.53□□□□□ -2
ATL3Q6DD88 AC022634.1-201ENST00000520765 532 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.53□□□□□ -2
ATL3Q6DD88 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
ATL3Q6DD88 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.53□□□□□ -2
ATL3Q6DD88 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.53□□□□□ -2
ATL3Q6DD88 AC027176.1-201ENST00000560204 514 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.53□□□□□ -2
ATL3Q6DD88 MIR3616-201ENST00000584070 92 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
ATL3Q6DD88 MIR5002-201ENST00000584713 97 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.53□□□□□ -2
ATL3Q6DD88 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
ATL3Q6DD88 AC239868.4-201ENST00000608318 671 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.53□□□□□ -2
ATL3Q6DD88 AC010133.1-201ENST00000615809 842 ntBASIC2.53□□□□□ -2
ATL3Q6DD88 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.53□□□□□ -2
ATL3Q6DD88 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ATL3Q6DD88 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ATL3Q6DD88 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.53□□□□□ -2
ATL3Q6DD88 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ATL3Q6DD88 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ATL3Q6DD88 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
ATL3Q6DD88 MIR19A-201ENST00000384878 82 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 MIR888-201ENST00000401186 77 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 TXNP7-201ENST00000406296 293 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 CCNG1P1-201ENST00000406783 885 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AL451054.2-201ENST00000420896 202 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.52□□□□□ -2.01
ATL3Q6DD88 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.52□□□□□ -2.01
ATL3Q6DD88 Z80107.1-201ENST00000436830 412 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.52□□□□□ -2.01
ATL3Q6DD88 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.52□□□□□ -2.01
ATL3Q6DD88 RPS15AP7-201ENST00000439294 405 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.52□□□□□ -2.01
ATL3Q6DD88 AL031659.1-201ENST00000447075 539 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 RPL23AP35-201ENST00000451906 501 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 ANKRD26P4-201ENST00000455755 950 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AC090255.1-201ENST00000495779 349 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AC110760.3-202ENST00000515177 371 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 SNORA31.18-201ENST00000517043 134 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.52□□□□□ -2.01
ATL3Q6DD88 GLYCAM1-201ENST00000546596 285 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AL391261.3-201ENST00000557194 520 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AL133153.1-201ENST00000557756 303 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 MYL12BP1-201ENST00000569826 507 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 FTX_3.1-201ENST00000610451 147 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AC008498.1-201ENST00000613012 531 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 AC068787.1-201ENST00000623908 691 ntBASIC2.52□□□□□ -2.01
ATL3Q6DD88 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.52□□□□□ -2.01
ATL3Q6DD88 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ATL3Q6DD88 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ATL3Q6DD88 AL137003.2-201ENST00000606924 2538 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ATL3Q6DD88 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.51□□□□□ -2.01
ATL3Q6DD88 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 U3.12-201ENST00000364498 214 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 RNU6-432P-201ENST00000384196 109 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 MIR524-201ENST00000385242 87 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.51□□□□□ -2.01
ATL3Q6DD88 MTCO3P45-201ENST00000443036 613 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 DDX3P2-201ENST00000446138 111 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.51□□□□□ -2.01
ATL3Q6DD88 AC109486.1-201ENST00000486833 374 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AC055855.1-201ENST00000489563 579 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AC106872.3-201ENST00000495104 446 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.51□□□□□ -2.01
ATL3Q6DD88 AP004247.1-201ENST00000531556 1289 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AL354943.1-201ENST00000572103 781 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.51□□□□□ -2.01
ATL3Q6DD88 MIR4513-201ENST00000581077 86 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 MIR3162-201ENST00000581818 82 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 OR1M4P-201ENST00000589199 287 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AC002545.1-201ENST00000592511 181 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AL355877.2-201ENST00000603670 358 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AL031281.1-201ENST00000604049 488 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.51□□□□□ -2.01
ATL3Q6DD88 AL607023.1-201ENST00000620045 248 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 MIR6132-201ENST00000622083 109 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AC025034.2-201ENST00000623264 286 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 AC103706.2-201ENST00000638080 240 ntBASIC2.51□□□□□ -2.01
ATL3Q6DD88 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.51□□□□□ -2.01
ATL3Q6DD88 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
ATL3Q6DD88 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.51□□□□□ -2.01
ATL3Q6DD88 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATL3Q6DD88 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ATL3Q6DD88 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATL3Q6DD88 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms