Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.63□□□□□ -2.31
RIF1Q5UIP0 MIR4658-201ENST00000584344 65 ntBASIC0.63□□□□□ -2.31
RIF1Q5UIP0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.63□□□□□ -2.31
RIF1Q5UIP0 AC023932.2-201ENST00000603176 175 ntBASIC0.63□□□□□ -2.31
RIF1Q5UIP0 RNU6-50P-201ENST00000362356 103 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 RNU6-1064P-201ENST00000410626 104 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.62□□□□□ -2.31
RIF1Q5UIP0 HMGN2P30-201ENST00000423237 256 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AC079780.1-201ENST00000428259 207 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 MED14P1-201ENST00000430517 648 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 HMGN2P16-201ENST00000456802 261 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 Y_RNA.654-201ENST00000497848 106 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AL355297.2-201ENST00000604792 129 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.62□□□□□ -2.31
RIF1Q5UIP0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AC013268.2-201ENST00000420753 337 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AC025768.1-201ENST00000510057 267 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 RN7SKP34-201ENST00000516142 244 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AL160236.1-201ENST00000556317 195 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 MIR4802-201ENST00000581881 80 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 AC106052.1-201ENST00000608029 497 ntBASIC0.62□□□□□ -2.31
RIF1Q5UIP0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.62□□□□□ -2.31
RIF1Q5UIP0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RIF1Q5UIP0 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RIF1Q5UIP0 RNA5SP63-201ENST00000391225 112 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AL356776.1-201ENST00000406574 447 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 ELOCP6-201ENST00000429066 328 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 ELOCP12-201ENST00000458706 328 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AC005410.1-202ENST00000460347 485 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AC245128.3-201ENST00000594721 748 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AC009974.1-201ENST00000608881 455 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RIF1Q5UIP0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RIF1Q5UIP0 MIR518A2-201ENST00000384966 87 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AC022022.1-201ENST00000430304 178 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AL031663.1-201ENST00000437445 219 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AL353689.1-201ENST00000438895 199 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AC117503.1-201ENST00000472241 394 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AL135752.1-201ENST00000479477 471 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RIF1Q5UIP0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RIF1Q5UIP0 HMGB3P17-201ENST00000504195 649 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 PCNAP1-201ENST00000505363 709 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 MRPS17P9-201ENST00000511924 393 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RIF1Q5UIP0 RNA5SP108-201ENST00000605921 117 ntBASIC0.61□□□□□ -2.31
RIF1Q5UIP0 AL356379.1-201ENST00000414105 126 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AC083875.1-201ENST00000419509 405 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 MTCO1P3-201ENST00000429327 192 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AL500527.1-201ENST00000448532 255 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 RPL21P104-201ENST00000464143 478 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 TRBVB-201ENST00000477100 408 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.6□□□□□ -2.31
RIF1Q5UIP0 IGLVI-20-201ENST00000519296 130 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AC009090.3-201ENST00000616553 565 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 uc_338.9-201ENST00000617424 182 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AL162373.1-201ENST00000620433 407 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AL355497.1-201ENST00000406262 551 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AL353898.1-201ENST00000444055 238 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AL078605.1-201ENST00000603529 500 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AC007275.1-201ENST00000621243 671 ntBASIC0.6□□□□□ -2.31
RIF1Q5UIP0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
RIF1Q5UIP0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
RIF1Q5UIP0 MTND6P13-201ENST00000443510 523 ntBASIC0.59□□□□□ -2.31
RIF1Q5UIP0 AC121161.1-201ENST00000510606 652 ntBASIC0.59□□□□□ -2.31
RIF1Q5UIP0 SNRPGP15-201ENST00000600149 222 ntBASIC0.59□□□□□ -2.31
RIF1Q5UIP0 AC025594.3-201ENST00000613068 790 ntBASIC0.59□□□□□ -2.31
RIF1Q5UIP0 AC006213.5-201ENST00000619673 288 ntBASIC0.59□□□□□ -2.31
RIF1Q5UIP0 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.59□□□□□ -2.31
RIF1Q5UIP0 ZNF519P1-201ENST00000449011 1626 ntBASIC0.59□□□□□ -2.31
RIF1Q5UIP0 AL390862.1-201ENST00000635467 1469 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 RNY4P24-201ENST00000362735 96 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 SNORA7.2-201ENST00000364446 145 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 RNU4-42P-201ENST00000364738 142 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 Y_RNA.413-201ENST00000384007 102 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 RNU2-41P-201ENST00000410991 178 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 AL133384.1-201ENST00000412744 351 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 AC060773.1-201ENST00000421698 310 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 OSTCP8-201ENST00000445117 448 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 Y_RNA.754-201ENST00000476024 102 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 MTCO3P35-201ENST00000485582 781 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
RIF1Q5UIP0 OR5H4P-201ENST00000510851 923 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 LINC00557-201ENST00000563184 1279 ntBASIC0.59□□□□□ -2.32
RIF1Q5UIP0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.59□□□□□ -2.32
RIF1Q5UIP0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.59□□□□□ -2.32
RIF1Q5UIP0 AL109918.3-201ENST00000603072 338 ntBASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms