Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AL356274.2-201ENST00000624379 3752 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RNU1-75P-201ENST00000347264 129 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 SNORA80A-201ENST00000363922 136 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RNA5SP51-201ENST00000364750 119 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 SMIM11P1-201ENST00000369586 178 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RNU6-1197P-201ENST00000391183 107 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RNA5SP293-201ENST00000410527 113 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RNU4-55P-201ENST00000410731 137 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RNA5SP31-201ENST00000411144 127 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 ATP5A1P2-201ENST00000412323 255 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 SDCBPP3-201ENST00000419629 891 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 OR2AS1P-201ENST00000427827 319 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AL356867.1-201ENST00000429623 299 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 MTCO2P11-201ENST00000431069 680 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 GPR143P-201ENST00000434155 205 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC020550.1-201ENST00000447385 163 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RPS4XP2-201ENST00000458402 793 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC092798.1-201ENST00000458542 409 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC023598.1-201ENST00000472521 361 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RN7SL432P-201ENST00000484057 298 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RPL37P25-201ENST00000507308 276 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC006445.2-201ENST00000510061 472 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 SCARNA15.2-201ENST00000516409 127 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 RNU6-1092P-201ENST00000516955 87 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC090572.1-201ENST00000519251 160 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC100870.1-201ENST00000522035 505 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AP006587.4-201ENST00000526053 529 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 CASP1P1-201ENST00000526345 212 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC026333.2-201ENST00000542164 106 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC008011.1-201ENST00000545989 227 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC011602.1-201ENST00000546484 331 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 MIR3609-201ENST00000582661 80 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AL022154.1-201ENST00000604698 785 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC007363.1-201ENST00000604736 620 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AP002360.4-201ENST00000606980 481 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC008536.2-201ENST00000607284 349 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AC007998.5-201ENST00000622938 237 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 TPTE2P4-201ENST00000258589 1605 ntBASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDLIM3Q53GG5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC068050.1-201ENST00000394891 380 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 RNU2-39P-201ENST00000410604 198 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AL513331.1-201ENST00000411908 397 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 RPS15AP6-201ENST00000420703 385 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 ISCA1P1-201ENST00000426679 387 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AL590383.1-201ENST00000428602 75 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC073464.1-201ENST00000429823 534 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 C8orf59P1-201ENST00000429930 303 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 HMGB1P27-201ENST00000431429 603 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC002486.1-201ENST00000435098 391 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 BNIP3P2-201ENST00000441221 577 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AL357552.1-201ENST00000445254 415 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC009237.8-201ENST00000445492 379 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC093899.1-201ENST00000457984 376 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC008155.2-201ENST00000464337 397 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC006512.1-201ENST00000468816 291 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC092185.1-201ENST00000491371 97 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 RPL9P6-201ENST00000492764 598 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC023194.1-201ENST00000493084 308 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 ARL4AP2-201ENST00000507378 601 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 RNU6-314P-201ENST00000516574 104 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 NDUFB9P3-201ENST00000521269 501 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM3Q53GG5 MIR4276-201ENST00000584832 70 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms