Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC58Q4VC31 AP000776.1-201ENST00000530032 1663 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 RNU6-741P-201ENST00000383889 107 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC58Q4VC31 MIR888-201ENST00000401186 77 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC58Q4VC31 ZNF863P-201ENST00000426746 417 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 HMGN2P3-201ENST00000433603 273 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 Z85994.2-201ENST00000434327 452 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC58Q4VC31 HMGN2P5-201ENST00000436882 273 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 RPL23AP16-201ENST00000441715 421 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 PTENP1-201ENST00000447117 1215 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 AL049874.1-201ENST00000489560 388 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 AP000926.3-201ENST00000497201 299 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC58Q4VC31 CR383656.7-201ENST00000548164 174 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 DUXAP1-201ENST00000556632 463 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 AC093510.2-201ENST00000562820 896 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.21□□□□□ -2.22
CCDC58Q4VC31 AL671309.1-201ENST00000603750 544 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 AL031176.1-201ENST00000604554 466 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC58Q4VC31 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.21□□□□□ -2.22
CCDC58Q4VC31 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC58Q4VC31 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC58Q4VC31 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC58Q4VC31 ENSAP3-201ENST00000312710 333 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC58Q4VC31 RNU6-60P-201ENST00000364792 103 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC58Q4VC31 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CCDC58Q4VC31 FABP5P14-201ENST00000437273 393 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 RSU1P2-202ENST00000437884 485 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC58Q4VC31 DNAJC19P8-201ENST00000452887 259 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AC034114.1-201ENST00000520293 285 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AC027104.1-201ENST00000563702 681 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AC011494.1-201ENST00000596454 237 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AC009974.1-201ENST00000608881 455 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 AC006338.1-201ENST00000618453 749 ntBASIC1.2□□□□□ -2.22
CCDC58Q4VC31 RNU6-251P-201ENST00000363235 104 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 RNU4-13P-201ENST00000364019 141 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 RNU6-203P-201ENST00000384038 104 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 RNU2-15P-201ENST00000410692 191 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 OR51A3P-201ENST00000413596 924 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AC079448.1-201ENST00000449377 373 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 HSPA8P13-201ENST00000523715 472 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AL359212.1-201ENST00000556608 614 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AC023825.1-201ENST00000566704 1030 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 AL035411.2-201ENST00000604022 421 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC58Q4VC31 ZNF72P-201ENST00000425869 1908 ntBASIC1.19□□□□□ -2.22
CCDC58Q4VC31 Y_RNA.67-201ENST00000362870 100 ntBASIC1.18□□□□□ -2.22
CCDC58Q4VC31 RNU6-152P-201ENST00000384037 107 ntBASIC1.18□□□□□ -2.22
CCDC58Q4VC31 SNORA67.5-201ENST00000391036 107 ntBASIC1.18□□□□□ -2.22
CCDC58Q4VC31 RNU2-47P-201ENST00000410649 186 ntBASIC1.18□□□□□ -2.22
CCDC58Q4VC31 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.18□□□□□ -2.22
CCDC58Q4VC31 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 TRBV12-1-201ENST00000479785 344 ntBASIC1.18□□□□□ -2.22
CCDC58Q4VC31 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 RNA5SP112-201ENST00000515937 99 ntBASIC1.18□□□□□ -2.22
CCDC58Q4VC31 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 FTX_3.1-201ENST00000610451 147 ntBASIC1.18□□□□□ -2.22
CCDC58Q4VC31 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
CCDC58Q4VC31 AL359854.1-201ENST00000614203 1594 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 RNU6-884P-201ENST00000363889 107 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 RNA5SP240-201ENST00000365355 128 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 RNU6-891P-201ENST00000384280 111 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AC009310.1-201ENST00000414414 451 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AL449283.1-202ENST00000418249 604 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms