Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC012443.1-201ENST00000605605 231 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AC020658.4-201ENST00000613987 684 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 SDR42E1P2-201ENST00000614861 481 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AL162373.1-201ENST00000620433 407 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 SDR42E1P4-201ENST00000620894 481 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AC015726.3-201ENST00000624501 418 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 RNU6-942P-201ENST00000363002 107 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 RNU6-920P-201ENST00000410926 92 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 RPS20P15-201ENST00000412792 311 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.6□□□□□ -2.31
PRKDCP78527 AL022238.1-201ENST00000442557 355 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 AL627224.1-201ENST00000448334 444 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 HMGN2P16-201ENST00000456802 261 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 AC022880.1-201ENST00000534017 973 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.6□□□□□ -2.31
PRKDCP78527 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.6□□□□□ -2.31
PRKDCP78527 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.6□□□□□ -2.31
PRKDCP78527 AC020923.1-201ENST00000624021 917 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
PRKDCP78527 RNA5SP276-201ENST00000362580 94 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.6□□□□□ -2.31
PRKDCP78527 AC023347.2-201ENST00000433994 462 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
PRKDCP78527 AC087588.1-201ENST00000462203 316 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.6□□□□□ -2.31
PRKDCP78527 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.6□□□□□ -2.31
PRKDCP78527 uc_338.22-201ENST00000622722 187 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 SNORD56-201ENST00000413522 71 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 OR6C66P-201ENST00000414917 930 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.6□□□□□ -2.31
PRKDCP78527 Z95118.1-201ENST00000421372 247 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 MTCYBP34-201ENST00000439552 670 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 RNF2P1-201ENST00000442955 1010 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 AC023141.11-201ENST00000508864 202 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 ERHP1-201ENST00000523006 310 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 SYF2P1-201ENST00000550658 413 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.6□□□□□ -2.31
PRKDCP78527 AC245884.12-201ENST00000615364 59 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 AC109809.1-201ENST00000619665 545 ntBASIC0.6□□□□□ -2.31
PRKDCP78527 ELL2P3-201ENST00000457883 1602 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
PRKDCP78527 RNU6-600P-201ENST00000362524 99 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 MIR17-201ENST00000385012 84 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 RPL23AP32-201ENST00000395315 459 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 AL161449.1-201ENST00000414531 1199 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 TPMTP4-201ENST00000450749 678 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.59□□□□□ -2.31
PRKDCP78527 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.59□□□□□ -2.31
PRKDCP78527 CASP1P1-201ENST00000526345 212 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 NDUFS5P6-201ENST00000529136 295 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.59□□□□□ -2.31
PRKDCP78527 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.59□□□□□ -2.31
PRKDCP78527 MIR4529-201ENST00000578110 78 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.59□□□□□ -2.31
PRKDCP78527 AL589994.1-201ENST00000404962 340 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.59□□□□□ -2.31
PRKDCP78527 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.59□□□□□ -2.31
PRKDCP78527 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.59□□□□□ -2.31
PRKDCP78527 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
PRKDCP78527 SNORA44.1-201ENST00000517031 108 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 MIR4636-201ENST00000582271 80 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 AC243829.6-201ENST00000612652 106 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 AC126177.8-201ENST00000618339 1015 ntBASIC0.59□□□□□ -2.31
PRKDCP78527 CIR1P3-201ENST00000405137 479 ntBASIC0.59□□□□□ -2.32
PRKDCP78527 USP12PX-201ENST00000432383 1057 ntBASIC0.59□□□□□ -2.32
PRKDCP78527 MTND2P8-201ENST00000450555 1025 ntBASIC0.59□□□□□ -2.32
PRKDCP78527 AC020699.1-201ENST00000505161 445 ntBASIC0.59□□□□□ -2.32
PRKDCP78527 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.59□□□□□ -2.32
PRKDCP78527 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.59□□□□□ -2.32
PRKDCP78527 AP000254.1-201ENST00000609934 520 ntBASIC0.59□□□□□ -2.32
PRKDCP78527 AC116563.2-201ENST00000624751 535 ntBASIC0.59□□□□□ -2.32
PRKDCP78527 HAUS6P2-201ENST00000433254 2404 ntBASIC0.59□□□□□ -2.32
PRKDCP78527 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
PRKDCP78527 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
PRKDCP78527 RNU6-532P-201ENST00000384318 107 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.58□□□□□ -2.32
PRKDCP78527 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.58□□□□□ -2.32
PRKDCP78527 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.58□□□□□ -2.32
PRKDCP78527 AC074051.3-201ENST00000570238 358 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 MIR409-201ENST00000362237 79 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 RBM43P1-201ENST00000476891 1081 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 TRBV8-1-201ENST00000481590 279 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.58□□□□□ -2.32
PRKDCP78527 AC105914.1-201ENST00000511798 226 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.58□□□□□ -2.32
PRKDCP78527 AP005902.1-201ENST00000521358 186 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 EIF4EP5-201ENST00000528228 640 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 OR5AL2P-201ENST00000532185 920 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.58□□□□□ -2.32
PRKDCP78527 AC022387.2-201ENST00000604050 448 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 NUTF2P8-201ENST00000604593 363 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 AC103810.9-201ENST00000606688 112 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.58□□□□□ -2.32
PRKDCP78527 SNORD114-2-201ENST00000363953 78 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 SNORA23-201ENST00000365128 182 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 MIR329-2-201ENST00000385029 84 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.58□□□□□ -2.32
PRKDCP78527 RPL7P30-201ENST00000420888 709 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 HMGN2P10-201ENST00000448085 265 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms