Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AC020914.4-201ENST00000597690 277 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 AC069234.5-201ENST00000611056 416 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 DUSP12P1-201ENST00000612874 516 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NKX6-1P78426 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.7□□□□□ -1.82
NKX6-1P78426 TPTEP1-208ENST00000636884 213 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 MTND4P29-201ENST00000503122 1372 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX6-1P78426 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX6-1P78426 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NKX6-1P78426 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NKX6-1P78426 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NKX6-1P78426 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NKX6-1P78426 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX6-1P78426 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NKX6-1P78426 AC118273.1-201ENST00000525324 3006 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.69□□□□□ -1.82
NKX6-1P78426 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX6-1P78426 AC073544.1-201ENST00000600110 1595 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX6-1P78426 MIR412-201ENST00000362142 91 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 RNU6-525P-201ENST00000363685 104 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 SNORD46.1-201ENST00000364139 104 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 Y_RNA.333-201ENST00000365274 102 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 SNORA1.3-201ENST00000384676 136 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.69□□□□□ -1.82
NKX6-1P78426 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.69□□□□□ -1.82
NKX6-1P78426 SNRPEP4-201ENST00000435815 279 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 RPS29P7-201ENST00000439662 171 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX6-1P78426 AC103851.1-201ENST00000506833 274 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX6-1P78426 HMGB3P15-201ENST00000507326 574 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 MTND3P25-201ENST00000509243 135 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 RNU6-864P-201ENST00000516256 108 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.69□□□□□ -1.82
NKX6-1P78426 AC011611.1-201ENST00000552179 197 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 RN7SL600P-201ENST00000581811 299 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 AL117336.2-201ENST00000602435 335 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 AL161729.3-201ENST00000603533 673 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX6-1P78426 AL031601.2-202ENST00000622650 282 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 AC019278.1-201ENST00000623516 479 ntBASIC3.69□□□□□ -1.82
NKX6-1P78426 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX6-1P78426 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX6-1P78426 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NKX6-1P78426 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NKX6-1P78426 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX6-1P78426 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NKX6-1P78426 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX6-1P78426 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX6-1P78426 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX6-1P78426 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
NKX6-1P78426 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NKX6-1P78426 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX6-1P78426 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX6-1P78426 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
NKX6-1P78426 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX6-1P78426 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.68□□□□□ -1.82
NKX6-1P78426 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX6-1P78426 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NKX6-1P78426 RNU6-254P-201ENST00000363377 107 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 MIR450B-201ENST00000401182 78 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 AL122016.1-201ENST00000403365 367 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 RPL21P65-201ENST00000406094 466 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 AL353621.1-201ENST00000418219 243 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 RPL21P109-201ENST00000422213 475 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX6-1P78426 COX6B1P7-201ENST00000430845 235 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX6-1P78426 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX6-1P78426 MRPL50P4-201ENST00000446432 475 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 RPS26P15-201ENST00000488067 348 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 AC022493.1-201ENST00000492984 337 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.68□□□□□ -1.82
NKX6-1P78426 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX6-1P78426 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX6-1P78426 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.68□□□□□ -1.82
NKX6-1P78426 RNA5SP519-201ENST00000516480 119 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.68□□□□□ -1.82
NKX6-1P78426 AC006064.5-201ENST00000541782 248 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 AC073539.2-201ENST00000597113 165 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 AC104662.1-201ENST00000604448 511 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 AL121757.2-201ENST00000611223 313 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 AC104237.2-201ENST00000612456 443 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NKX6-1P78426 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX6-1P78426 RMST_7.1-201ENST00000621935 268 ntBASIC3.68□□□□□ -1.82
NKX6-1P78426 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX6-1P78426 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX6-1P78426 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NKX6-1P78426 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX6-1P78426 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NKX6-1P78426 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.68□□□□□ -1.82
NKX6-1P78426 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX6-1P78426 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX6-1P78426 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms