Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC006518.2-201ENST00000542513 940 ntBASIC1.89□□□□□ -2.11
TPM4P67936 MIR4789-201ENST00000577469 82 ntBASIC1.89□□□□□ -2.11
TPM4P67936 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.89□□□□□ -2.11
TPM4P67936 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.89□□□□□ -2.11
TPM4P67936 AC110994.2-201ENST00000635481 492 ntBASIC1.89□□□□□ -2.11
TPM4P67936 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.89□□□□□ -2.11
TPM4P67936 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TPM4P67936 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TPM4P67936 SNORA23-201ENST00000365128 182 ntBASIC1.88□□□□□ -2.11
TPM4P67936 RNU6-748P-201ENST00000384648 107 ntBASIC1.88□□□□□ -2.11
TPM4P67936 RNU6-997P-201ENST00000384725 107 ntBASIC1.88□□□□□ -2.11
TPM4P67936 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TPM4P67936 MIR1294-201ENST00000408503 142 ntBASIC1.88□□□□□ -2.11
TPM4P67936 RNU2-63P-201ENST00000410792 194 ntBASIC1.88□□□□□ -2.11
TPM4P67936 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM4P67936 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM4P67936 AL512661.1-201ENST00000434586 1253 ntBASIC1.88□□□□□ -2.11
TPM4P67936 DNAJC19P4-201ENST00000440115 345 ntBASIC1.88□□□□□ -2.11
TPM4P67936 AL160314.1-201ENST00000490836 438 ntBASIC1.88□□□□□ -2.11
TPM4P67936 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM4P67936 RNA5SP182-201ENST00000516064 82 ntBASIC1.88□□□□□ -2.11
TPM4P67936 OR5AL2P-201ENST00000532185 920 ntBASIC1.88□□□□□ -2.11
TPM4P67936 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.88□□□□□ -2.11
TPM4P67936 AC243960.4-201ENST00000600532 288 ntBASIC1.88□□□□□ -2.11
TPM4P67936 MTND5P29-201ENST00000458676 1807 ntBASIC1.88□□□□□ -2.11
TPM4P67936 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.88□□□□□ -2.11
TPM4P67936 AL138713.1-201ENST00000624026 2130 ntBASIC1.87□□□□□ -2.11
TPM4P67936 SNRPEP3-201ENST00000338402 276 ntBASIC1.87□□□□□ -2.11
TPM4P67936 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TPM4P67936 MIR16-2-201ENST00000362117 81 ntBASIC1.87□□□□□ -2.11
TPM4P67936 RNU4-82P-201ENST00000362443 140 ntBASIC1.87□□□□□ -2.11
TPM4P67936 NDUFS5P1-201ENST00000405668 289 ntBASIC1.87□□□□□ -2.11
TPM4P67936 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.87□□□□□ -2.11
TPM4P67936 RNA5SP450-201ENST00000411206 102 ntBASIC1.87□□□□□ -2.11
TPM4P67936 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM4P67936 AL158823.1-201ENST00000418441 478 ntBASIC1.87□□□□□ -2.11
TPM4P67936 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM4P67936 AC092427.1-201ENST00000439177 601 ntBASIC1.87□□□□□ -2.11
TPM4P67936 AC003989.2-201ENST00000440224 169 ntBASIC1.87□□□□□ -2.11
TPM4P67936 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.87□□□□□ -2.11
TPM4P67936 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.87□□□□□ -2.11
TPM4P67936 SNORD121B-201ENST00000458838 81 ntBASIC1.87□□□□□ -2.11
TPM4P67936 RNU6-1261P-201ENST00000517194 104 ntBASIC1.87□□□□□ -2.11
TPM4P67936 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.87□□□□□ -2.11
TPM4P67936 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.87□□□□□ -2.11
TPM4P67936 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.87□□□□□ -2.11
TPM4P67936 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM4P67936 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.87□□□□□ -2.11
TPM4P67936 AC124283.4-201ENST00000581815 456 ntBASIC1.87□□□□□ -2.11
TPM4P67936 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TPM4P67936 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.87□□□□□ -2.11
TPM4P67936 AL390208.1-201ENST00000605885 644 ntBASIC1.87□□□□□ -2.11
TPM4P67936 AC106052.1-201ENST00000608029 497 ntBASIC1.87□□□□□ -2.11
TPM4P67936 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM4P67936 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.87□□□□□ -2.11
TPM4P67936 AC087241.4-201ENST00000612441 480 ntBASIC1.87□□□□□ -2.11
TPM4P67936 MIR1322-201ENST00000638013 71 ntBASIC1.87□□□□□ -2.11
TPM4P67936 AP000648.3-201ENST00000623539 4507 ntBASIC1.86□□□□□ -2.11
TPM4P67936 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TPM4P67936 RNU6-253P-201ENST00000384730 105 ntBASIC1.86□□□□□ -2.11
TPM4P67936 DHFRP6-201ENST00000401776 268 ntBASIC1.86□□□□□ -2.11
TPM4P67936 RPL7P27-201ENST00000403775 720 ntBASIC1.86□□□□□ -2.11
TPM4P67936 MTCYBP38-201ENST00000417160 1123 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC027644.1-201ENST00000419595 298 ntBASIC1.86□□□□□ -2.11
TPM4P67936 MTCO2P5-201ENST00000422621 426 ntBASIC1.86□□□□□ -2.11
TPM4P67936 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.86□□□□□ -2.11
TPM4P67936 AC009238.1-201ENST00000442165 424 ntBASIC1.86□□□□□ -2.11
TPM4P67936 MOB1AP2-201ENST00000446060 614 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC009237.6-201ENST00000446969 424 ntBASIC1.86□□□□□ -2.11
TPM4P67936 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM4P67936 RPL30P9-201ENST00000465586 330 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC055855.1-201ENST00000489563 579 ntBASIC1.86□□□□□ -2.11
TPM4P67936 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
TPM4P67936 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TPM4P67936 AC020699.1-201ENST00000505161 445 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM4P67936 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC023632.1-201ENST00000518463 375 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM4P67936 AC107953.1-201ENST00000522216 297 ntBASIC1.86□□□□□ -2.11
TPM4P67936 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM4P67936 AC110588.1-201ENST00000559699 137 ntBASIC1.86□□□□□ -2.11
TPM4P67936 LINC00933-203ENST00000559812 219 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC233702.2-202ENST00000562547 291 ntBASIC1.86□□□□□ -2.11
TPM4P67936 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.86□□□□□ -2.11
TPM4P67936 AP001542.2-201ENST00000593141 364 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC091152.3-201ENST00000604227 325 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AL773524.1-201ENST00000614065 229 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AL590808.1-201ENST00000618696 141 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC064859.1-201ENST00000624741 174 ntBASIC1.86□□□□□ -2.11
TPM4P67936 AC131280.1-202ENST00000624067 4211 ntBASIC1.86□□□□□ -2.11
TPM4P67936 RNU6-28P-201ENST00000362378 107 ntBASIC1.85□□□□□ -2.11
TPM4P67936 Y_RNA.25-201ENST00000362528 102 ntBASIC1.85□□□□□ -2.11
TPM4P67936 U3.13-201ENST00000364804 214 ntBASIC1.85□□□□□ -2.11
TPM4P67936 RNU6-637P-201ENST00000384050 107 ntBASIC1.85□□□□□ -2.11
TPM4P67936 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
TPM4P67936 AL356432.1-201ENST00000405809 419 ntBASIC1.85□□□□□ -2.11
TPM4P67936 RPL26P27-201ENST00000414397 437 ntBASIC1.85□□□□□ -2.11
TPM4P67936 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
TPM4P67936 AL139421.1-201ENST00000423010 169 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms