| BACE1 | P56817 | AC104389.3-201 | ENST00000445629 | 235 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | Z83846.1-201 | ENST00000446798 | 265 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | RPS20P20-201 | ENST00000460498 | 340 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC092754.2-201 | ENST00000463506 | 460 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | LINC02077-201 | ENST00000465795 | 409 nt | TSL 3 BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC126182.1-201 | ENST00000478134 | 357 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | RN7SL283P-201 | ENST00000489055 | 303 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | EPGN-208 | ENST00000509145 | 222 nt | TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC106744.2-201 | ENST00000513955 | 898 nt | TSL 5 BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | CKS1BP7-201 | ENST00000522230 | 235 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AP002748.2-201 | ENST00000528671 | 348 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC079584.2-201 | ENST00000548756 | 515 nt | TSL 3 BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC013417.1-201 | ENST00000549896 | 271 nt | TSL 5 BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC124947.2-202 | ENST00000552735 | 133 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | LINC02328-203 | ENST00000557195 | 682 nt | TSL 3 BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | ACTR3BP3-201 | ENST00000565577 | 979 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC005951.2-201 | ENST00000576282 | 495 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | MIR4474-201 | ENST00000579189 | 78 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | MIR4648-201 | ENST00000580107 | 72 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | MIR4506-201 | ENST00000584693 | 77 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC110760.3-201 | ENST00000598794 | 467 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC046143.2-201 | ENST00000609789 | 160 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC004696.1-201 | ENST00000614345 | 607 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC068831.7-201 | ENST00000616954 | 363 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | HS1BP3-208 | ENST00000631166 | 78 nt | TSL 5 BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | CD44-239 | ENST00000639002 | 528 nt | TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | ZNF280D-204 | ENST00000558320 | 3666 nt | TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | JMJD1C-210 | ENST00000542921 | 8149 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | UEVLD-208 | ENST00000535484 | 1963 nt | TSL 2 BASIC | 2.85 | □□□□□ -1.95 | | |
| BACE1 | P56817 | CCDC30-212 | ENST00000507855 | 2445 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | ZMYM1-203 | ENST00000373330 | 4203 nt | APPRIS P1 TSL 1 (best) BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | RTKN2-202 | ENST00000373789 | 6641 nt | APPRIS P1 TSL 1 (best) BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | EVI2B-202 | ENST00000577894 | 1597 nt | APPRIS P1 TSL 2 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | ELL2P3-201 | ENST00000457883 | 1602 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | OR52E2-201 | ENST00000321522 | 978 nt | APPRIS P1 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | RNU1-39P-201 | ENST00000383897 | 165 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | TRDJ1-201 | ENST00000390473 | 51 nt | APPRIS P1 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | TRAJ17-201 | ENST00000390520 | 63 nt | APPRIS P1 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | FCF1P10-201 | ENST00000407590 | 479 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | SPATA17-AS1-201 | ENST00000415765 | 420 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | TMEM167AP1-201 | ENST00000423409 | 219 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AL162414.1-201 | ENST00000426204 | 744 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AL162400.2-201 | ENST00000427547 | 157 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC007285.2-201 | ENST00000433088 | 518 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | TAAR7P-201 | ENST00000436141 | 242 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | RPL17P49-201 | ENST00000443728 | 411 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC009237.8-201 | ENST00000445492 | 379 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC114485.1-201 | ENST00000447916 | 657 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC009961.3-201 | ENST00000449832 | 765 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | FDX1P2-201 | ENST00000450769 | 375 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | TBL1XR1-AS1-201 | ENST00000454723 | 414 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | SNRPGP9-201 | ENST00000456025 | 225 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | RNA5SP269-201 | ENST00000459032 | 137 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC012181.1-201 | ENST00000479895 | 423 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | PLCXD2-AS1-201 | ENST00000493131 | 491 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | RPL30P5-201 | ENST00000494923 | 336 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AL627309.4-201 | ENST00000496488 | 457 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | RNU6-64P-201 | ENST00000517119 | 105 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC104232.2-201 | ENST00000519680 | 769 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC060788.1-201 | ENST00000521318 | 469 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC239802.1-201 | ENST00000531288 | 406 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | OR5V1-216 | ENST00000543825 | 1048 nt | APPRIS P1 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | LINC02384-208 | ENST00000546086 | 565 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC123904.3-201 | ENST00000547218 | 814 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | LINC02464-201 | ENST00000552060 | 368 nt | TSL 2 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC019183.1-201 | ENST00000580524 | 505 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AP005062.1-201 | ENST00000581502 | 607 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | MIR548AB-201 | ENST00000584917 | 84 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | LINC01533-205 | ENST00000593056 | 607 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC099566.1-211 | ENST00000595188 | 737 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | U73023.1-201 | ENST00000603134 | 700 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC008962.1-201 | ENST00000605729 | 304 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC068276.1-201 | ENST00000605793 | 379 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC103810.6-201 | ENST00000606708 | 136 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | RNU6-87P-201 | ENST00000607561 | 108 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AL391813.2-201 | ENST00000609113 | 322 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC108747.1-201 | ENST00000609508 | 535 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | BX664608.1-201 | ENST00000610519 | 487 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | AC073114.1-201 | ENST00000612027 | 490 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | uc_338.12-201 | ENST00000616344 | 181 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | MIR6076-201 | ENST00000617521 | 113 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | SNHG22-203 | ENST00000617833 | 660 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| BACE1 | P56817 | LRRC49-224 | ENST00000560691 | 2531 nt | TSL 2 BASIC | 2.84 | □□□□□ -1.96 | | |
| BACE1 | P56817 | FBXO11-201 | ENST00000402508 | 3844 nt | APPRIS P1 TSL 1 (best) BASIC | 2.84 | □□□□□ -1.96 | | |
| BACE1 | P56817 | CHORDC1-205 | ENST00000529726 | 4805 nt | TSL 2 BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | FGF7P2-201 | ENST00000332473 | 296 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | MDM2-205 | ENST00000348801 | 798 nt | TSL 1 (best) BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | SNORD116-2-201 | ENST00000384274 | 95 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | SNORA1.3-201 | ENST00000384676 | 136 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | SNORD116-6-201 | ENST00000384711 | 96 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | RNY3P10-201 | ENST00000384764 | 102 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | MIR504-201 | ENST00000385065 | 83 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | RPS4XP3-201 | ENST00000398541 | 413 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | RNU2-62P-201 | ENST00000410868 | 191 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | AC007064.1-201 | ENST00000412238 | 351 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | ELOCP17-201 | ENST00000414751 | 326 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | AL354733.1-203 | ENST00000417672 | 495 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | SDCBPP3-201 | ENST00000419629 | 891 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | AL451054.2-201 | ENST00000420896 | 202 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| BACE1 | P56817 | SLC44A3-AS1-205 | ENST00000424505 | 612 nt | BASIC | 2.83 | □□□□□ -1.96 | | |