Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN6P56747 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN6P56747 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.1□□□□□ -2.07
CLDN6P56747 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.1□□□□□ -2.07
CLDN6P56747 AL049779.4-201ENST00000604500 156 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 AC016727.1-205ENST00000605437 569 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN6P56747 AC239868.4-201ENST00000608318 671 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 AC005332.10-201ENST00000612725 619 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN6P56747 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN6P56747 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN6P56747 AC007336.1-201ENST00000576365 3828 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 AC010889.1-201ENST00000566193 2666 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLDN6P56747 RNU6-1083P-201ENST00000384022 107 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 CCNG1P1-201ENST00000406783 885 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 BTF3L4P3-201ENST00000418879 476 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 BPY2DP-201ENST00000422208 265 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.09□□□□□ -2.07
CLDN6P56747 SNRPEP9-201ENST00000436794 238 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 RPS27AP10-201ENST00000496103 208 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.09□□□□□ -2.07
CLDN6P56747 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN6P56747 AC117522.2-201ENST00000510049 657 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.09□□□□□ -2.07
CLDN6P56747 AC024589.1-201ENST00000512207 263 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 SNORA31.11-201ENST00000516528 139 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN6P56747 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN6P56747 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.09□□□□□ -2.07
CLDN6P56747 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN6P56747 AK6P1-201ENST00000540219 478 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.09□□□□□ -2.07
CLDN6P56747 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN6P56747 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN6P56747 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN6P56747 AC105137.2-201ENST00000569073 466 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 OR4K7P-201ENST00000580232 945 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 MIR3199-1-201ENST00000582434 88 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.09□□□□□ -2.07
CLDN6P56747 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.09□□□□□ -2.07
CLDN6P56747 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN6P56747 AP000942.3-201ENST00000603702 160 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 AC021749.1-201ENST00000604322 607 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 MIR7111-201ENST00000619751 72 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 MIR6766-201ENST00000622641 72 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
CLDN6P56747 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.09□□□□□ -2.07
CLDN6P56747 AC011477.1-204ENST00000623416 1325 ntBASIC2.09□□□□□ -2.08
CLDN6P56747 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CLDN6P56747 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.09□□□□□ -2.08
CLDN6P56747 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
CLDN6P56747 AC080100.1-201ENST00000624239 5356 ntBASIC2.09□□□□□ -2.08
CLDN6P56747 AC110491.1-201ENST00000562191 2010 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN6P56747 RNU6-223P-201ENST00000362830 107 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 RNU6-289P-201ENST00000364093 107 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN6P56747 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN6P56747 AL449283.1-202ENST00000418249 604 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN6P56747 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN6P56747 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN6P56747 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN6P56747 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN6P56747 RPS15AP36-201ENST00000492022 382 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 RNU6-390P-201ENST00000516259 103 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN6P56747 AC087241.2-201ENST00000535801 324 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN6P56747 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 AL589743.7-201ENST00000612637 233 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 AL449363.1-201ENST00000617815 186 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 AC002543.1-201ENST00000299783 1954 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 MTND4P35-201ENST00000604257 1375 ntBASIC2.08□□□□□ -2.08
CLDN6P56747 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN6P56747 Y_RNA.245-201ENST00000364493 95 ntBASIC2.07□□□□□ -2.08
CLDN6P56747 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
CLDN6P56747 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN6P56747 RNU6-920P-201ENST00000410926 92 ntBASIC2.07□□□□□ -2.08
CLDN6P56747 NDUFS5P4-201ENST00000412983 318 ntBASIC2.07□□□□□ -2.08
CLDN6P56747 AF274854.1-201ENST00000413236 615 ntBASIC2.07□□□□□ -2.08
CLDN6P56747 RPL23AP36-201ENST00000413895 458 ntBASIC2.07□□□□□ -2.08
CLDN6P56747 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN6P56747 Z82209.1-201ENST00000422141 2135 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms