Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.8□□□□□ -1.96
PEX3P56589 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.8□□□□□ -1.96
PEX3P56589 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.8□□□□□ -1.96
PEX3P56589 AC234778.2-201ENST00000566241 354 ntBASIC2.8□□□□□ -1.96
PEX3P56589 MTCO3P24-201ENST00000572729 782 ntBASIC2.8□□□□□ -1.96
PEX3P56589 AC009977.1-201ENST00000586015 570 ntBASIC2.8□□□□□ -1.96
PEX3P56589 HMGN1P30-201ENST00000589286 268 ntBASIC2.8□□□□□ -1.96
PEX3P56589 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.8□□□□□ -1.96
PEX3P56589 DUXAP4-201ENST00000603046 613 ntBASIC2.8□□□□□ -1.96
PEX3P56589 AC013553.2-201ENST00000604244 589 ntBASIC2.8□□□□□ -1.96
PEX3P56589 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.8□□□□□ -1.96
PEX3P56589 AC009570.1-201ENST00000609599 745 ntBASIC2.8□□□□□ -1.96
PEX3P56589 BX664608.1-201ENST00000610519 487 ntBASIC2.8□□□□□ -1.96
PEX3P56589 AC091304.9-201ENST00000612091 226 ntBASIC2.8□□□□□ -1.96
PEX3P56589 AC013476.2-201ENST00000614456 459 ntBASIC2.8□□□□□ -1.96
PEX3P56589 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PEX3P56589 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PEX3P56589 RNU5A-1-201ENST00000362698 116 ntBASIC2.79□□□□□ -1.96
PEX3P56589 RNU6-297P-201ENST00000384636 107 ntBASIC2.79□□□□□ -1.96
PEX3P56589 MIR27B-201ENST00000385129 97 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AL359634.1-202ENST00000404721 284 ntBASIC2.79□□□□□ -1.96
PEX3P56589 HMGN1P14-201ENST00000412459 517 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AC080125.1-201ENST00000414888 684 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.79□□□□□ -1.96
PEX3P56589 Z85995.1-201ENST00000415547 335 ntBASIC2.79□□□□□ -1.96
PEX3P56589 UBE2FP1-201ENST00000416536 447 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.79□□□□□ -1.96
PEX3P56589 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.79□□□□□ -1.96
PEX3P56589 TAAR7P-201ENST00000436141 242 ntBASIC2.79□□□□□ -1.96
PEX3P56589 MTND6P13-201ENST00000443510 523 ntBASIC2.79□□□□□ -1.96
PEX3P56589 RPL17P49-201ENST00000443728 411 ntBASIC2.79□□□□□ -1.96
PEX3P56589 MTND1P12-201ENST00000455231 147 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.79□□□□□ -1.96
PEX3P56589 SNRPFP4-201ENST00000456366 242 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.79□□□□□ -1.96
PEX3P56589 SNORD42A-201ENST00000459584 64 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AC008481.1-201ENST00000463278 396 ntBASIC2.79□□□□□ -1.96
PEX3P56589 UBE2DNL-203ENST00000474922 222 ntBASIC2.79□□□□□ -1.96
PEX3P56589 RAP1BP2-201ENST00000478270 544 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PEX3P56589 CDC42P4-201ENST00000510507 563 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AL359273.1-201ENST00000510918 627 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.79□□□□□ -1.96
PEX3P56589 RNU6-711P-201ENST00000517255 106 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.79□□□□□ -1.96
PEX3P56589 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.79□□□□□ -1.96
PEX3P56589 AP003181.2-201ENST00000528941 181 ntBASIC2.79□□□□□ -1.96
PEX3P56589 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PEX3P56589 AL358072.1-201ENST00000604156 575 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AC068276.1-201ENST00000605793 379 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AC080013.6-201ENST00000606185 215 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AP002826.1-201ENST00000608835 315 ntBASIC2.79□□□□□ -1.96
PEX3P56589 AC103710.2-201ENST00000609912 942 ntBASIC2.79□□□□□ -1.96
PEX3P56589 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.79□□□□□ -1.96
PEX3P56589 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.79□□□□□ -1.96
PEX3P56589 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PEX3P56589 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PEX3P56589 AC008568.2-201ENST00000623862 2313 ntBASIC2.79□□□□□ -1.96
PEX3P56589 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PEX3P56589 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.78□□□□□ -1.96
PEX3P56589 AC092104.1-201ENST00000497346 1441 ntBASIC2.78□□□□□ -1.96
PEX3P56589 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PEX3P56589 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PEX3P56589 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PEX3P56589 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PEX3P56589 RNU6-511P-201ENST00000363496 107 ntBASIC2.78□□□□□ -1.96
PEX3P56589 RNU4-40P-201ENST00000364351 143 ntBASIC2.78□□□□□ -1.96
PEX3P56589 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PEX3P56589 MIR1290-201ENST00000408735 78 ntBASIC2.78□□□□□ -1.96
PEX3P56589 Y_RNA.598-201ENST00000410480 95 ntBASIC2.78□□□□□ -1.96
PEX3P56589 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.78□□□□□ -1.96
PEX3P56589 MTATP6P30-201ENST00000443540 664 ntBASIC2.78□□□□□ -1.96
PEX3P56589 ELOCP30-201ENST00000447108 299 ntBASIC2.78□□□□□ -1.96
PEX3P56589 ST13P20-201ENST00000447996 1065 ntBASIC2.78□□□□□ -1.96
PEX3P56589 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.78□□□□□ -1.96
PEX3P56589 RPL31P3-201ENST00000458430 332 ntBASIC2.78□□□□□ -1.96
PEX3P56589 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.78□□□□□ -1.96
PEX3P56589 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PEX3P56589 AC117532.1-201ENST00000514638 323 ntBASIC2.78□□□□□ -1.96
PEX3P56589 RN7SKP24-201ENST00000515888 284 ntBASIC2.78□□□□□ -1.96
PEX3P56589 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.78□□□□□ -1.96
PEX3P56589 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.78□□□□□ -1.96
PEX3P56589 ELOCP31-201ENST00000540463 467 ntBASIC2.78□□□□□ -1.96
PEX3P56589 RPL21P5-201ENST00000554662 472 ntBASIC2.78□□□□□ -1.96
PEX3P56589 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.78□□□□□ -1.96
PEX3P56589 KC877982.1-201ENST00000602313 470 ntBASIC2.78□□□□□ -1.96
PEX3P56589 AL359999.1-201ENST00000604513 294 ntBASIC2.78□□□□□ -1.96
PEX3P56589 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PEX3P56589 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.78□□□□□ -1.96
PEX3P56589 AC093783.1-201ENST00000612976 329 ntBASIC2.78□□□□□ -1.96
PEX3P56589 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.78□□□□□ -1.96
PEX3P56589 AC009509.4-201ENST00000619202 509 ntBASIC2.78□□□□□ -1.96
PEX3P56589 OR4G2P-202ENST00000641004 1759 ntBASIC2.78□□□□□ -1.96
PEX3P56589 AL390237.1-201ENST00000404226 1415 ntBASIC2.77□□□□□ -1.97
PEX3P56589 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PEX3P56589 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PEX3P56589 RNU5F-7P-201ENST00000363696 115 ntBASIC2.77□□□□□ -1.97
PEX3P56589 U3.12-201ENST00000364498 214 ntBASIC2.77□□□□□ -1.97
PEX3P56589 RNY4P16-201ENST00000364768 94 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms