Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL355836.1-201ENST00000555951 870 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 AC106782.4-201ENST00000568264 210 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.45□□□□□ -1.86
HDAC4P56524 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.45□□□□□ -1.86
HDAC4P56524 MIR4276-201ENST00000584832 70 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 AL133393.1-201ENST00000603277 287 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 AC010133.1-201ENST00000615809 842 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 SNORD39.4-201ENST00000620099 78 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.45□□□□□ -1.86
HDAC4P56524 FRG1KP-201ENST00000623592 341 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 CR381653.2-201ENST00000624041 768 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HDAC4P56524 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HDAC4P56524 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HDAC4P56524 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.44□□□□□ -1.86
HDAC4P56524 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
HDAC4P56524 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HDAC4P56524 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HDAC4P56524 Y_RNA.1-201ENST00000352915 104 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 SNORD56.2-201ENST00000363242 71 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 Y_RNA.372-201ENST00000365599 102 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HDAC4P56524 RNU6-74P-201ENST00000384235 107 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 Y_RNA.500-201ENST00000384466 111 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 MIR514A1-201ENST00000385133 98 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HDAC4P56524 RNA5SP229-201ENST00000410809 99 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.44□□□□□ -1.86
HDAC4P56524 AL158156.1-201ENST00000422509 473 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AC018630.2-202ENST00000422992 927 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.44□□□□□ -1.86
HDAC4P56524 AL590383.1-201ENST00000428602 75 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AC073464.1-201ENST00000429823 534 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AC005019.1-201ENST00000436455 431 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 PSPHP1-201ENST00000450062 261 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 SNRPGP6-201ENST00000451124 220 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 SNORD97-201ENST00000459187 142 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.44□□□□□ -1.86
HDAC4P56524 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.44□□□□□ -1.86
HDAC4P56524 APOOP4-201ENST00000513530 597 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 RNU7-51P-201ENST00000516560 62 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 RNU6-314P-201ENST00000516574 104 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.44□□□□□ -1.86
HDAC4P56524 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.44□□□□□ -1.86
HDAC4P56524 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.44□□□□□ -1.86
HDAC4P56524 AC004024.1-201ENST00000549244 247 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 SUB1P2-201ENST00000556401 297 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AC136619.2-201ENST00000563361 631 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.44□□□□□ -1.86
HDAC4P56524 AC015917.1-201ENST00000579654 510 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 MIR4506-201ENST00000584693 77 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AC078899.3-201ENST00000599065 212 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AC068944.2-201ENST00000610373 403 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 uc_338.1-201ENST00000612113 180 ntBASIC3.44□□□□□ -1.86
HDAC4P56524 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.44□□□□□ -1.86
HDAC4P56524 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.44□□□□□ -1.86
HDAC4P56524 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.44□□□□□ -1.86
HDAC4P56524 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HDAC4P56524 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.43□□□□□ -1.86
HDAC4P56524 RNU6-108P-201ENST00000365558 107 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 RNU5E-6P-201ENST00000365574 115 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 MIR181A1-201ENST00000385026 110 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 RNU1-101P-201ENST00000391171 127 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AC068050.1-201ENST00000394891 380 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AL031121.1-201ENST00000406553 254 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AC245291.1-201ENST00000419501 328 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 SDCBPP3-201ENST00000419629 891 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AL356867.1-201ENST00000429623 299 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 FCF1P1-201ENST00000432690 571 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AC002486.1-201ENST00000435098 391 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.43□□□□□ -1.86
HDAC4P56524 UBE2V1P8-201ENST00000437166 265 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 HMGB3P11-201ENST00000440127 604 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.43□□□□□ -1.86
HDAC4P56524 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.43□□□□□ -1.86
HDAC4P56524 AL590664.1-201ENST00000448065 339 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 MTND2P24-201ENST00000453434 806 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AC007182.2-201ENST00000489251 402 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AC068657.1-201ENST00000520807 306 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AP001893.2-201ENST00000526949 202 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.43□□□□□ -1.86
HDAC4P56524 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.43□□□□□ -1.86
HDAC4P56524 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.43□□□□□ -1.86
HDAC4P56524 AC025449.1-201ENST00000603896 529 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HDAC4P56524 AL121992.2-201ENST00000606262 256 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AC017083.3-201ENST00000609955 700 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.43□□□□□ -1.86
HDAC4P56524 U4.5-201ENST00000617137 123 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 AL160394.1-201ENST00000624765 724 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.43□□□□□ -1.86
HDAC4P56524 OR4G2P-202ENST00000641004 1759 ntBASIC3.43□□□□□ -1.86
HDAC4P56524 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.42□□□□□ -1.86
HDAC4P56524 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HDAC4P56524 API5P2-201ENST00000397055 1498 ntBASIC3.42□□□□□ -1.86
HDAC4P56524 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HDAC4P56524 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HDAC4P56524 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HDAC4P56524 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms