Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR767-201ENST00000390228 109 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LIMK1P53667 RNA5SP508-201ENST00000411327 119 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.08□□□□□ -1.92
LIMK1P53667 HMGB3P11-201ENST00000440127 604 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 COX6CP2-201ENST00000444980 225 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 AC020550.1-201ENST00000447385 163 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 EEF1B2P7-201ENST00000451177 676 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 Y_RNA.638-201ENST00000459374 113 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 MTND1P3-201ENST00000484956 952 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.08□□□□□ -1.92
LIMK1P53667 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.08□□□□□ -1.92
LIMK1P53667 AC011979.2-201ENST00000527568 352 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 AC007536.1-201ENST00000533382 349 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.08□□□□□ -1.92
LIMK1P53667 TRAV28-201ENST00000557548 323 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.08□□□□□ -1.92
LIMK1P53667 AC137800.2-201ENST00000574375 120 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.08□□□□□ -1.92
LIMK1P53667 MIR4293-201ENST00000584305 78 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 AC138749.5-201ENST00000611461 208 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 AC116165.2-201ENST00000616705 206 ntBASIC3.08□□□□□ -1.92
LIMK1P53667 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.08□□□□□ -1.92
LIMK1P53667 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.08□□□□□ -1.92
LIMK1P53667 AC008264.2-201ENST00000610193 3731 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LIMK1P53667 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LIMK1P53667 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LIMK1P53667 AC022336.2-201ENST00000568966 2538 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 RNU1-70P-201ENST00000362618 164 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 U3.6-201ENST00000363622 211 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 RNU6-701P-201ENST00000384059 107 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 SNORA40.3-201ENST00000390964 122 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 NDUFS5P1-201ENST00000405668 289 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 RNU2-8P-201ENST00000410727 190 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 RN7SKP123-201ENST00000410732 291 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 RPL19P1-201ENST00000411635 428 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 BX682237.1-201ENST00000415016 335 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 Z85995.1-201ENST00000415547 335 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.07□□□□□ -1.92
LIMK1P53667 AL589872.1-201ENST00000426602 288 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AL365496.1-201ENST00000426885 215 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AC137499.1-201ENST00000427602 88 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AC098826.1-201ENST00000433943 471 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 Z82210.1-201ENST00000440037 231 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 RPS24P13-201ENST00000442520 397 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 MTATP6P30-201ENST00000443540 664 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AL109933.2-201ENST00000452651 260 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.07□□□□□ -1.92
LIMK1P53667 snoU109.1-201ENST00000459339 135 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AC087588.1-201ENST00000462203 316 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 RPS20P22-201ENST00000473700 357 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 TRBV12-1-201ENST00000479785 344 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AL160314.1-201ENST00000490836 438 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AC083906.5-201ENST00000503722 328 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AC010587.1-201ENST00000505809 469 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 RNU2-10P-201ENST00000516375 211 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 RNA5SP290-201ENST00000517133 127 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AP003467.2-201ENST00000520175 319 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LIMK1P53667 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LIMK1P53667 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.07□□□□□ -1.92
LIMK1P53667 AC009977.1-201ENST00000586015 570 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 HMGN1P30-201ENST00000589286 268 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 ATP1B3P1-201ENST00000605365 821 ntBASIC3.07□□□□□ -1.92
LIMK1P53667 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.07□□□□□ -1.92
LIMK1P53667 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LIMK1P53667 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LIMK1P53667 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LIMK1P53667 RNY4P34-201ENST00000364779 95 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 SNORD15B-201ENST00000384714 146 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 MIR1302-8-201ENST00000408342 128 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 AL356968.1-201ENST00000416622 474 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 RPL7P37-201ENST00000425095 738 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 AC063976.3-201ENST00000426849 329 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.06□□□□□ -1.92
LIMK1P53667 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.06□□□□□ -1.92
LIMK1P53667 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.06□□□□□ -1.92
LIMK1P53667 AC022018.1-201ENST00000430685 241 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 AC016696.1-201ENST00000446949 318 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 RPL23AP20-201ENST00000447965 421 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.06□□□□□ -1.92
LIMK1P53667 AL033528.1-201ENST00000453780 140 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 RNA5SP269-201ENST00000459032 137 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 SNORD97-201ENST00000459187 142 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 RBM43P1-201ENST00000476891 1081 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 RPS29P26-201ENST00000477483 171 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.06□□□□□ -1.92
LIMK1P53667 AL135752.1-201ENST00000479477 471 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 RN7SL283P-201ENST00000489055 303 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 Y_RNA.672-201ENST00000516289 104 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.06□□□□□ -1.92
LIMK1P53667 AC107934.2-201ENST00000518653 310 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.06□□□□□ -1.92
LIMK1P53667 AP002453.2-201ENST00000533503 320 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.06□□□□□ -1.92
LIMK1P53667 Z94722.1-201ENST00000604328 474 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 805 ms