Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBEC1P41238 ELOCP14-201ENST00000428070 331 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.06□□□□□ -1.92
APOBEC1P41238 AL512844.2-201ENST00000433990 593 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 ELOCP7-201ENST00000439968 331 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBEC1P41238 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.06□□□□□ -1.92
APOBEC1P41238 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBEC1P41238 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBEC1P41238 AL136097.1-201ENST00000456945 913 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 RPS29P15-201ENST00000458329 171 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 AC104806.1-201ENST00000508720 308 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.06□□□□□ -1.92
APOBEC1P41238 RNU6-123P-201ENST00000516163 102 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 RNU6-718P-201ENST00000516166 105 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 Y_RNA.704-201ENST00000516851 102 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.06□□□□□ -1.92
APOBEC1P41238 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.06□□□□□ -1.92
APOBEC1P41238 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBEC1P41238 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
APOBEC1P41238 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBEC1P41238 AK6P1-201ENST00000540219 478 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.06□□□□□ -1.92
APOBEC1P41238 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBEC1P41238 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBEC1P41238 AC015917.1-201ENST00000579654 510 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.06□□□□□ -1.92
APOBEC1P41238 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.06□□□□□ -1.92
APOBEC1P41238 AL161798.1-201ENST00000604630 131 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 AC130324.3-201ENST00000614165 542 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 AL355365.1-201ENST00000616480 294 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
APOBEC1P41238 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.06□□□□□ -1.92
APOBEC1P41238 AC027309.3-201ENST00000623419 351 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 MIR1321-201ENST00000637766 79 ntBASIC3.06□□□□□ -1.92
APOBEC1P41238 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.06□□□□□ -1.92
APOBEC1P41238 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.06□□□□□ -1.92
APOBEC1P41238 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOBEC1P41238 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBEC1P41238 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOBEC1P41238 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOBEC1P41238 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBEC1P41238 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBEC1P41238 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBEC1P41238 AC103710.2-202ENST00000641454 2853 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 RNU6-1287P-201ENST00000362914 107 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 RNU6-512P-201ENST00000364438 103 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 Y_RNA.381-201ENST00000365666 102 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 RNU6-483P-201ENST00000384088 108 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 RNU6-1029P-201ENST00000384109 107 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 RNU6-1060P-201ENST00000384664 107 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 Y_RNA.573-201ENST00000384763 105 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 SNORD115-47-201ENST00000391226 86 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 RPS4XP3-201ENST00000398541 413 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.05□□□□□ -1.92
APOBEC1P41238 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBEC1P41238 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AL451062.2-201ENST00000427515 271 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
APOBEC1P41238 AC016691.1-201ENST00000441321 413 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 DPPA3P1-201ENST00000448050 469 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC003071.1-201ENST00000451219 789 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 RNU6-420P-201ENST00000458780 107 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 GMFBP1-201ENST00000467831 427 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AL121769.1-201ENST00000469473 401 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 RPL7P5-201ENST00000471472 736 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.05□□□□□ -1.92
APOBEC1P41238 AL163973.1-201ENST00000484753 577 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 RPS15AP34-201ENST00000487776 387 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 RNU6-1281P-201ENST00000516223 105 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 SNORA40.12-201ENST00000516329 111 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 RNA5SP471-201ENST00000516971 106 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.05□□□□□ -1.92
APOBEC1P41238 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 AC109635.3-201ENST00000529536 185 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC011602.1-201ENST00000546484 331 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBEC1P41238 MIR3186-201ENST00000577404 85 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.05□□□□□ -1.92
APOBEC1P41238 AC008521.1-201ENST00000587471 187 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC008752.3-201ENST00000588113 712 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBEC1P41238 AL162413.1-201ENST00000603198 110 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBEC1P41238 MIR6076-201ENST00000617521 113 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 SNORD39.4-201ENST00000620099 78 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC092628.2-201ENST00000622492 339 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC011155.2-201ENST00000623202 216 ntBASIC3.05□□□□□ -1.92
APOBEC1P41238 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBEC1P41238 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBEC1P41238 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms