Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC073968.1-201ENST00000618594 637 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AL391262.2-201ENST00000622466 494 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AL356585.4-201ENST00000623078 1229 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN4AP35499 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN4AP35499 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SCN4AP35499 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SCN4AP35499 AC099786.3-201ENST00000565735 1410 ntBASIC2.09□□□□□ -2.07
SCN4AP35499 AC233981.2-201ENST00000611524 1614 ntBASIC2.09□□□□□ -2.07
SCN4AP35499 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SCN4AP35499 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SCN4AP35499 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
SCN4AP35499 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SCN4AP35499 RPL21P1-201ENST00000399532 476 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 RNU4-22P-201ENST00000411058 166 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 AC068533.2-201ENST00000411872 306 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.09□□□□□ -2.08
SCN4AP35499 RNU7-136P-201ENST00000458819 69 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 RNU1-123P-201ENST00000458950 160 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 RNU7-59P-201ENST00000459101 61 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.09□□□□□ -2.08
SCN4AP35499 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.09□□□□□ -2.08
SCN4AP35499 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.09□□□□□ -2.08
SCN4AP35499 AP001330.4-201ENST00000604350 154 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 AL590282.1-201ENST00000610379 1136 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 AL356596.1-201ENST00000624230 379 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 AC099654.9-201ENST00000637055 678 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 MIR1322-201ENST00000638013 71 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 AC093536.2-201ENST00000565257 1406 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 SGO1P2-201ENST00000429458 1589 ntBASIC2.09□□□□□ -2.08
SCN4AP35499 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SCN4AP35499 SNORA40.2-201ENST00000390847 128 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 MIR1323-201ENST00000408090 73 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SCN4AP35499 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN4AP35499 AC024082.2-201ENST00000434771 238 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 ARPC3P1-201ENST00000437218 533 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 MTND1P31-201ENST00000449206 961 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN4AP35499 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN4AP35499 AC010285.1-201ENST00000470580 392 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 AC021146.8-201ENST00000507455 733 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN4AP35499 AC116353.3-201ENST00000511215 249 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN4AP35499 RNU6-1073P-201ENST00000517182 106 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 VN1R83P-201ENST00000595685 445 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SCN4AP35499 AC012669.1-201ENST00000603209 283 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 AC112220.3-201ENST00000605502 502 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 AC009974.1-201ENST00000608881 455 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 AL590099.1-201ENST00000615276 138 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 AL357080.1-201ENST00000617394 239 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 AP000676.3-201ENST00000623299 569 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 AC095031.1-201ENST00000623685 672 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SCN4AP35499 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.08□□□□□ -2.08
SCN4AP35499 OR4G3P-201ENST00000633500 913 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
SCN4AP35499 AL353746.1-201ENST00000566293 6881 ntBASIC2.08□□□□□ -2.08
SCN4AP35499 UBE2L2-201ENST00000254302 429 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 MIR122-201ENST00000385044 85 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 MIR613-201ENST00000385248 95 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 RNU6-1176P-201ENST00000390955 107 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 RNU6-754P-201ENST00000391166 107 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN4AP35499 USP9YP13-201ENST00000417797 480 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 TOMM22P1-201ENST00000418578 312 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN4AP35499 SNRPEP4-201ENST00000435815 279 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 EEF1A1P39-201ENST00000440791 250 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 RPS4XP11-201ENST00000446897 772 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 EEF1E1P1-201ENST00000446998 430 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN4AP35499 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN4AP35499 AC109445.1-201ENST00000512356 383 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 MTATP6P9-201ENST00000515039 680 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 RNU6-1225P-201ENST00000516336 65 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 SNORA70.16-201ENST00000516390 95 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SCN4AP35499 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN4AP35499 AC002550.2-201ENST00000621246 394 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 AL159972.1-201ENST00000625150 448 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN4AP35499 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN4AP35499 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SCN4AP35499 AC103710.2-202ENST00000641454 2853 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN4AP35499 FO393413.1-201ENST00000402892 195 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 MTCYBP38-201ENST00000417160 1123 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN4AP35499 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN4AP35499 MTCYBP34-201ENST00000439552 670 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 SDCBPP1-201ENST00000440192 890 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 OR6K5P-201ENST00000447050 945 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 USP9YP10-201ENST00000454868 628 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 AC096751.1-202ENST00000502691 1067 ntBASIC2.07□□□□□ -2.08
SCN4AP35499 UBE2V1P12-201ENST00000503954 474 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms