Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC068781.1-201ENST00000488231 618 ntBASIC1.9□□□□□ -2.11
RPA3P35244 AL160314.1-201ENST00000490836 438 ntBASIC1.9□□□□□ -2.11
RPA3P35244 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.9□□□□□ -2.11
RPA3P35244 AC008628.1-201ENST00000508663 265 ntBASIC1.9□□□□□ -2.11
RPA3P35244 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.9□□□□□ -2.11
RPA3P35244 RNY4P37-201ENST00000516225 96 ntBASIC1.9□□□□□ -2.11
RPA3P35244 RNU7-193P-201ENST00000516723 65 ntBASIC1.9□□□□□ -2.11
RPA3P35244 RNA5SP290-201ENST00000517133 127 ntBASIC1.9□□□□□ -2.11
RPA3P35244 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.9□□□□□ -2.11
RPA3P35244 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.9□□□□□ -2.11
RPA3P35244 AC007151.1-201ENST00000572774 483 ntBASIC1.9□□□□□ -2.11
RPA3P35244 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
RPA3P35244 AC024619.4-201ENST00000580924 316 ntBASIC1.9□□□□□ -2.11
RPA3P35244 MIR3945-201ENST00000581853 98 ntBASIC1.9□□□□□ -2.11
RPA3P35244 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.9□□□□□ -2.11
RPA3P35244 SDR42E1P2-201ENST00000614861 481 ntBASIC1.9□□□□□ -2.11
RPA3P35244 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
RPA3P35244 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.9□□□□□ -2.11
RPA3P35244 AC110491.1-201ENST00000562191 2010 ntBASIC1.9□□□□□ -2.11
RPA3P35244 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPA3P35244 MTCO1P56-201ENST00000401674 224 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
RPA3P35244 GSTA9P-201ENST00000406231 611 ntBASIC1.89□□□□□ -2.11
RPA3P35244 RNU2-2P-201ENST00000410396 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA3P35244 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.89□□□□□ -2.11
RPA3P35244 MICF-203ENST00000432679 129 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AC010153.1-201ENST00000432862 727 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AL451074.3-201ENST00000437709 472 ntBASIC1.89□□□□□ -2.11
RPA3P35244 COX7BP2-201ENST00000437976 242 ntBASIC1.89□□□□□ -2.11
RPA3P35244 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.89□□□□□ -2.11
RPA3P35244 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.89□□□□□ -2.11
RPA3P35244 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA3P35244 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA3P35244 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPA3P35244 AL513124.1-201ENST00000450410 614 ntBASIC1.89□□□□□ -2.11
RPA3P35244 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.89□□□□□ -2.11
RPA3P35244 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.89□□□□□ -2.11
RPA3P35244 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA3P35244 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPA3P35244 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.89□□□□□ -2.11
RPA3P35244 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA3P35244 MTCO2P15-201ENST00000532655 656 ntBASIC1.89□□□□□ -2.11
RPA3P35244 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.89□□□□□ -2.11
RPA3P35244 YWHAZP1-201ENST00000556286 722 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AC005261.5-201ENST00000596280 355 ntBASIC1.89□□□□□ -2.11
RPA3P35244 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA3P35244 AL391813.1-201ENST00000603098 260 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AC004805.2-201ENST00000605382 482 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.89□□□□□ -2.11
RPA3P35244 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AC009268.2-201ENST00000621925 457 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AC073592.7-201ENST00000623659 507 ntBASIC1.89□□□□□ -2.11
RPA3P35244 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA3P35244 AC025048.6-202ENST00000627667 438 ntBASIC1.89□□□□□ -2.11
RPA3P35244 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
RPA3P35244 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RPA3P35244 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPA3P35244 ZNF355P-201ENST00000427301 3216 ntBASIC1.88□□□□□ -2.11
RPA3P35244 AL161781.1-201ENST00000354277 403 ntBASIC1.88□□□□□ -2.11
RPA3P35244 snoZ40.1-201ENST00000364540 72 ntBASIC1.88□□□□□ -2.11
RPA3P35244 RNU2-40P-201ENST00000410833 196 ntBASIC1.88□□□□□ -2.11
RPA3P35244 AL030996.1-201ENST00000411430 235 ntBASIC1.88□□□□□ -2.11
RPA3P35244 BTF3L4P3-201ENST00000418879 476 ntBASIC1.88□□□□□ -2.11
RPA3P35244 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.88□□□□□ -2.11
RPA3P35244 EIF4EP4-201ENST00000424916 578 ntBASIC1.88□□□□□ -2.11
RPA3P35244 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA3P35244 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.88□□□□□ -2.11
RPA3P35244 RPL30P4-201ENST00000429309 333 ntBASIC1.88□□□□□ -2.11
RPA3P35244 ZYG11AP1-201ENST00000430329 837 ntBASIC1.88□□□□□ -2.11
RPA3P35244 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.88□□□□□ -2.11
RPA3P35244 AC098831.1-201ENST00000440661 216 ntBASIC1.88□□□□□ -2.11
RPA3P35244 PGBD4P3-201ENST00000440731 581 ntBASIC1.88□□□□□ -2.11
RPA3P35244 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA3P35244 TRBV1-201ENST00000476502 284 ntBASIC1.88□□□□□ -2.11
RPA3P35244 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA3P35244 AC022493.1-201ENST00000492984 337 ntBASIC1.88□□□□□ -2.11
RPA3P35244 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RPA3P35244 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.88□□□□□ -2.11
RPA3P35244 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.88□□□□□ -2.11
RPA3P35244 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA3P35244 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.88□□□□□ -2.11
RPA3P35244 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA3P35244 AL353997.4-201ENST00000586196 166 ntBASIC1.88□□□□□ -2.11
RPA3P35244 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.88□□□□□ -2.11
RPA3P35244 AC239868.4-201ENST00000608318 671 ntBASIC1.88□□□□□ -2.11
RPA3P35244 AC107075.1-201ENST00000613695 314 ntBASIC1.88□□□□□ -2.11
RPA3P35244 TUG1_2.1-201ENST00000614234 87 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms