Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
COL4A5P29400 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.51□□□□□ -2.17
COL4A5P29400 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A5P29400 AC024082.2-201ENST00000434771 238 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 RAC1P7-201ENST00000445367 377 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 RPS15AP34-201ENST00000487776 387 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 MTND3P24-201ENST00000506306 329 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AC019176.1-201ENST00000518519 225 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 MTCYBP27-201ENST00000555160 670 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 UCA1.1-201ENST00000620952 75 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AC040168.1-201ENST00000623594 991 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 MFSD8-213ENST00000641134 1327 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 RNU6-1066P-201ENST00000363573 105 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 RN7SKP51-201ENST00000410781 304 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AL356320.2-201ENST00000417263 507 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AC079780.1-201ENST00000428259 207 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 RPL31P54-201ENST00000429803 370 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A5P29400 AL445687.1-201ENST00000439946 251 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AL592447.1-201ENST00000447592 540 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 RFC5P1-201ENST00000454419 874 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 RBM43P1-201ENST00000476891 1081 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 RPS27P26-201ENST00000494583 239 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AC008427.1-201ENST00000503102 655 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL4A5P29400 AC118282.2-201ENST00000508739 374 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 IGJP1-201ENST00000522682 475 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 NIFKP8-201ENST00000560500 874 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AC104229.1-201ENST00000561364 255 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AC093519.1-201ENST00000566109 298 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.51□□□□□ -2.17
COL4A5P29400 AC007229.1-201ENST00000590455 412 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AL031274.2-201ENST00000599419 203 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AP003973.1-201ENST00000604639 691 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A5P29400 AL356585.4-201ENST00000623078 1229 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 AP006248.3-201ENST00000623580 594 ntBASIC1.51□□□□□ -2.17
COL4A5P29400 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A5P29400 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
COL4A5P29400 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
COL4A5P29400 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
COL4A5P29400 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
COL4A5P29400 DBF4P1-201ENST00000412976 1892 ntBASIC1.5□□□□□ -2.17
COL4A5P29400 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
COL4A5P29400 SNORA38-201ENST00000363946 132 ntBASIC1.5□□□□□ -2.17
COL4A5P29400 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.5□□□□□ -2.17
COL4A5P29400 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A5P29400 AC009296.1-201ENST00000443146 155 ntBASIC1.5□□□□□ -2.17
COL4A5P29400 AL078601.1-201ENST00000444542 271 ntBASIC1.5□□□□□ -2.17
COL4A5P29400 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.5□□□□□ -2.17
COL4A5P29400 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A5P29400 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.5□□□□□ -2.17
COL4A5P29400 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
COL4A5P29400 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.5□□□□□ -2.17
COL4A5P29400 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.5□□□□□ -2.17
COL4A5P29400 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.5□□□□□ -2.17
COL4A5P29400 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A5P29400 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.5□□□□□ -2.17
COL4A5P29400 HSPE1P3-201ENST00000559254 309 ntBASIC1.5□□□□□ -2.17
COL4A5P29400 AL450270.1-201ENST00000606160 391 ntBASIC1.5□□□□□ -2.17
COL4A5P29400 AC097468.3-201ENST00000607956 456 ntBASIC1.5□□□□□ -2.17
COL4A5P29400 SNHG22-203ENST00000617833 660 ntBASIC1.5□□□□□ -2.17
COL4A5P29400 RNU6-37P-201ENST00000362692 107 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 RNA5SP393-201ENST00000363423 117 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 RNU6-11P-201ENST00000364234 107 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 MIR222-201ENST00000384992 110 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A5P29400 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A5P29400 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A5P29400 AC092047.1-201ENST00000424997 240 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 RPL35AP22-201ENST00000436855 335 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A5P29400 AC005297.2-201ENST00000450430 606 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 Z82190.1-201ENST00000454534 490 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A5P29400 RNU6-775P-201ENST00000459318 96 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 SUMO2P6-201ENST00000505273 288 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.49□□□□□ -2.17
COL4A5P29400 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A5P29400 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A5P29400 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A5P29400 HMGB1P14-201ENST00000557424 591 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.49□□□□□ -2.17
COL4A5P29400 MIR3616-201ENST00000584070 92 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.49□□□□□ -2.17
COL4A5P29400 AC105224.1-201ENST00000587055 421 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A5P29400 OR4H6P-202ENST00000603819 340 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 KATNBL1P5-201ENST00000605015 517 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A5P29400 AC116618.1-201ENST00000634617 774 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 MKKS-204ENST00000639674 192 ntBASIC1.49□□□□□ -2.17
COL4A5P29400 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A5P29400 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A5P29400 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A5P29400 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
COL4A5P29400 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.48□□□□□ -2.17
COL4A5P29400 MTCO2P31-201ENST00000402702 684 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms