Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU2-2P-201ENST00000410396 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 SKA2P1-201ENST00000425592 390 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 TOMM20P4-201ENST00000427861 435 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 AC092634.2-201ENST00000428146 1010 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 SEPT7P5-201ENST00000434048 306 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.47□□□□□ -2.17
HLA-DMBP28068 MTND2P20-201ENST00000440805 661 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DMBP28068 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DMBP28068 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DMBP28068 AC092902.1-201ENST00000486999 259 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 AC106872.3-201ENST00000495104 446 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DMBP28068 AC096571.1-202ENST00000506634 735 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 RNU6-840P-201ENST00000517275 65 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 RNU2-19P-201ENST00000517288 84 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 FAM92A1P1-201ENST00000528023 890 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.47□□□□□ -2.17
HLA-DMBP28068 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DMBP28068 AL096840.1-201ENST00000603287 93 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 AC069304.2-201ENST00000605154 435 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.15-201ENST00000611544 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.16-201ENST00000613119 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.12-201ENST00000613778 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.20-201ENST00000613956 192 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.9-201ENST00000615427 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.11-201ENST00000616345 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.2-201ENST00000616535 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.3-201ENST00000617785 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.19-201ENST00000618602 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 RNU2-1-201ENST00000618664 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.6-201ENST00000619225 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.5-201ENST00000619465 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 AC024581.2-201ENST00000619986 252 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 U2.10-201ENST00000620268 191 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 YWHAEP7-203ENST00000622054 312 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 AP002791.1-201ENST00000623291 381 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.47□□□□□ -2.17
HLA-DMBP28068 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.47□□□□□ -2.17
HLA-DMBP28068 MTND5P30-201ENST00000452896 1731 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 RNU6-778P-201ENST00000363269 103 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 RNU6-234P-201ENST00000365229 104 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DMBP28068 RNU1-39P-201ENST00000383897 165 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 RNU6-468P-201ENST00000384003 109 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 MCTS2P-201ENST00000394552 546 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC019129.1-201ENST00000403786 261 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 MTND3P20-201ENST00000407663 186 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DMBP28068 TPMTP2-201ENST00000414372 726 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC007435.1-201ENST00000421086 415 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 FO393414.1-201ENST00000428697 1184 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AL445646.1-201ENST00000431784 216 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 GTF2IP7-202ENST00000436677 309 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 SNRPEP9-201ENST00000436794 238 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 MOB1AP2-201ENST00000446060 614 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC008481.1-201ENST00000463278 396 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 RPL23AP42-201ENST00000471152 471 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 RPL21P99-201ENST00000480369 423 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AL160314.1-201ENST00000490836 438 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC006499.2-201ENST00000513470 337 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 RNU6-714P-201ENST00000516963 103 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 SNORD19.2-201ENST00000516978 73 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 AL049838.1-201ENST00000563647 981 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 MIR3122-201ENST00000577243 73 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC022662.1-201ENST00000580252 331 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 MIR4524B-201ENST00000581569 115 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC105245.1-201ENST00000581934 244 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AL357094.1-201ENST00000603845 844 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC104763.3-201ENST00000613765 618 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AL357080.1-201ENST00000617394 239 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 U4atac.1-201ENST00000618345 95 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AL445264.1-201ENST00000621719 171 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 AL118508.4-201ENST00000624142 1176 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 PISRT1-201ENST00000626175 531 ntBASIC1.46□□□□□ -2.18
HLA-DMBP28068 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DMBP28068 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
HLA-DMBP28068 AC107982.1-201ENST00000507171 1300 ntBASIC1.45□□□□□ -2.18
HLA-DMBP28068 AC011477.1-204ENST00000623416 1325 ntBASIC1.45□□□□□ -2.18
HLA-DMBP28068 AC002543.1-201ENST00000299783 1954 ntBASIC1.45□□□□□ -2.18
HLA-DMBP28068 AC009487.4-201ENST00000624969 3585 ntBASIC1.45□□□□□ -2.18
HLA-DMBP28068 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DMBP28068 RNU6-1078P-201ENST00000364522 103 ntBASIC1.45□□□□□ -2.18
HLA-DMBP28068 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DMBP28068 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DMBP28068 RNA5SP270-201ENST00000411361 118 ntBASIC1.45□□□□□ -2.18
HLA-DMBP28068 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DMBP28068 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.45□□□□□ -2.18
HLA-DMBP28068 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms