Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TNFSF4P23510 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFSF4P23510 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TNFSF4P23510 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFSF4P23510 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.5□□□□□ -1.85
TNFSF4P23510 AC068538.1-201ENST00000376856 336 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 AL356057.2-201ENST00000403318 432 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 MIR1251-201ENST00000408552 70 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 RNU6-628P-201ENST00000410675 107 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 RNU6-607P-201ENST00000411283 108 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF4P23510 RSL24D1P6-201ENST00000426934 401 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 SRIP2-201ENST00000428470 166 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 PRPS1P1-201ENST00000445305 876 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 NFU1P2-201ENST00000448700 469 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 AL136097.1-201ENST00000456945 913 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 RNU7-167P-201ENST00000459160 62 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 RPL31P58-201ENST00000469001 379 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 RN7SL585P-201ENST00000470538 280 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 AC006517.1-201ENST00000480485 328 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 RN7SL271P-201ENST00000487601 295 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 RPS29P20-201ENST00000489592 171 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF4P23510 CCDC34P1-201ENST00000507441 517 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 MIR892C-201ENST00000516410 77 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.5□□□□□ -1.85
TNFSF4P23510 CENPUP1-201ENST00000526649 1202 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.5□□□□□ -1.85
TNFSF4P23510 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF4P23510 MIR4801-201ENST00000582704 82 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 MIR5684-201ENST00000585074 65 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFSF4P23510 AL020991.1-201ENST00000612314 373 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 RMST_4.1-201ENST00000616886 107 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.5□□□□□ -1.85
TNFSF4P23510 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFSF4P23510 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFSF4P23510 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF4P23510 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF4P23510 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
TNFSF4P23510 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.49□□□□□ -1.85
TNFSF4P23510 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF4P23510 RNA5SP388-201ENST00000362584 119 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.49□□□□□ -1.85
TNFSF4P23510 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFSF4P23510 AL159169.1-201ENST00000421119 127 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFSF4P23510 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFSF4P23510 AL121601.2-201ENST00000438019 707 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 AC006011.1-201ENST00000442758 349 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFSF4P23510 Y_RNA.654-201ENST00000497848 106 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 MTND3P25-201ENST00000509243 135 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFSF4P23510 AC022634.1-201ENST00000520765 532 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFSF4P23510 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFSF4P23510 AC078814.3-201ENST00000553036 491 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 OR11H5P-201ENST00000554039 926 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFSF4P23510 AC234778.2-201ENST00000566241 354 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 HMGB1P50-201ENST00000605814 607 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 RNU6-89P-201ENST00000606519 100 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 AC128687.2-201ENST00000609657 566 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 RMST_3.1-201ENST00000611651 109 ntBASIC3.49□□□□□ -1.85
TNFSF4P23510 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFSF4P23510 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFSF4P23510 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TNFSF4P23510 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFSF4P23510 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF4P23510 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFSF4P23510 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF4P23510 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF4P23510 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFSF4P23510 AC008669.1-201ENST00000565823 2178 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
TNFSF4P23510 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFSF4P23510 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFSF4P23510 SNORD3E-201ENST00000362899 217 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 RNU6-799P-201ENST00000363567 107 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 Y_RNA.157-201ENST00000363638 102 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 SNORD14B-201ENST00000364533 90 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 MIR34A-201ENST00000385130 110 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 BX682237.1-201ENST00000415016 335 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFSF4P23510 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFSF4P23510 AC245291.1-201ENST00000419501 328 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 TOMM20P4-201ENST00000427861 435 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 RPL21P40-201ENST00000428586 483 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 AC091390.1-201ENST00000433904 331 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFSF4P23510 HLA-N-201ENST00000437516 135 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 AC011005.2-201ENST00000487324 359 ntBASIC3.48□□□□□ -1.85
TNFSF4P23510 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.48□□□□□ -1.85
TNFSF4P23510 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.48□□□□□ -1.85
TNFSF4P23510 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFSF4P23510 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.48□□□□□ -1.85
TNFSF4P23510 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms