Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MTATP6P30-201ENST00000443540 664 ntBASIC1.85□□□□□ -2.11
CD28P10747 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.85□□□□□ -2.11
CD28P10747 RNU7-59P-201ENST00000459101 61 ntBASIC1.85□□□□□ -2.11
CD28P10747 AC010631.1-201ENST00000474150 156 ntBASIC1.85□□□□□ -2.11
CD28P10747 AC008716.1-201ENST00000511084 513 ntBASIC1.85□□□□□ -2.11
CD28P10747 MTND5P13-201ENST00000513046 1079 ntBASIC1.85□□□□□ -2.11
CD28P10747 SNORA31.3-201ENST00000516029 96 ntBASIC1.85□□□□□ -2.11
CD28P10747 SCARNA11.3-201ENST00000517276 130 ntBASIC1.85□□□□□ -2.11
CD28P10747 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.85□□□□□ -2.11
CD28P10747 AC025881.1-201ENST00000518851 512 ntBASIC1.85□□□□□ -2.11
CD28P10747 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.85□□□□□ -2.11
CD28P10747 AP000873.5-201ENST00000533906 236 ntBASIC1.85□□□□□ -2.11
CD28P10747 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.85□□□□□ -2.11
CD28P10747 MTND4P33-201ENST00000556706 766 ntBASIC1.85□□□□□ -2.11
CD28P10747 AL049779.4-201ENST00000604500 156 ntBASIC1.85□□□□□ -2.11
CD28P10747 AC007349.4-201ENST00000608114 532 ntBASIC1.85□□□□□ -2.11
CD28P10747 AC009974.1-201ENST00000608881 455 ntBASIC1.85□□□□□ -2.11
CD28P10747 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.85□□□□□ -2.11
CD28P10747 AC034102.8-201ENST00000615146 484 ntBASIC1.85□□□□□ -2.11
CD28P10747 MIR1291-201ENST00000627649 87 ntBASIC1.85□□□□□ -2.11
CD28P10747 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.85□□□□□ -2.11
CD28P10747 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.85□□□□□ -2.11
CD28P10747 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.85□□□□□ -2.11
CD28P10747 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CD28P10747 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CD28P10747 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CD28P10747 RNU6-778P-201ENST00000363269 103 ntBASIC1.84□□□□□ -2.11
CD28P10747 SNORA25.6-201ENST00000364121 118 ntBASIC1.84□□□□□ -2.11
CD28P10747 RNU1-138P-201ENST00000384093 164 ntBASIC1.84□□□□□ -2.11
CD28P10747 ANAPC10P1-201ENST00000395991 556 ntBASIC1.84□□□□□ -2.11
CD28P10747 BTF3P7-201ENST00000407097 488 ntBASIC1.84□□□□□ -2.11
CD28P10747 RNA5SP181-201ENST00000410246 98 ntBASIC1.84□□□□□ -2.11
CD28P10747 RPL21P24-201ENST00000413752 448 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC107081.1-201ENST00000414975 361 ntBASIC1.84□□□□□ -2.11
CD28P10747 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.84□□□□□ -2.11
CD28P10747 MTCO2P21-201ENST00000419780 677 ntBASIC1.84□□□□□ -2.11
CD28P10747 DPH3P2-201ENST00000422618 250 ntBASIC1.84□□□□□ -2.11
CD28P10747 BX276092.3-201ENST00000424182 230 ntBASIC1.84□□□□□ -2.11
CD28P10747 SUMO1P4-201ENST00000429430 302 ntBASIC1.84□□□□□ -2.11
CD28P10747 AL356320.1-201ENST00000429616 163 ntBASIC1.84□□□□□ -2.11
CD28P10747 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.84□□□□□ -2.11
CD28P10747 MTND1P28-201ENST00000435623 950 ntBASIC1.84□□□□□ -2.11
CD28P10747 RPS15AP5-201ENST00000436276 388 ntBASIC1.84□□□□□ -2.11
CD28P10747 SNRPEP9-201ENST00000436794 238 ntBASIC1.84□□□□□ -2.11
CD28P10747 HMGB3P12-201ENST00000438745 556 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC098831.1-201ENST00000440661 216 ntBASIC1.84□□□□□ -2.11
CD28P10747 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.84□□□□□ -2.11
CD28P10747 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.84□□□□□ -2.11
CD28P10747 FDX1P2-201ENST00000450769 375 ntBASIC1.84□□□□□ -2.11
CD28P10747 RPL12P25-201ENST00000455592 494 ntBASIC1.84□□□□□ -2.11
CD28P10747 DUXAP8-207ENST00000456786 622 ntBASIC1.84□□□□□ -2.11
CD28P10747 RPL23AP70-201ENST00000483361 460 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC055855.1-201ENST00000489563 579 ntBASIC1.84□□□□□ -2.11
CD28P10747 RPL37P25-201ENST00000507308 276 ntBASIC1.84□□□□□ -2.11
CD28P10747 LTV1P1-201ENST00000510683 1237 ntBASIC1.84□□□□□ -2.11
CD28P10747 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.84□□□□□ -2.11
CD28P10747 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.84□□□□□ -2.11
CD28P10747 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.84□□□□□ -2.11
CD28P10747 OR4R1P-201ENST00000529879 463 ntBASIC1.84□□□□□ -2.11
CD28P10747 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.84□□□□□ -2.11
CD28P10747 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.84□□□□□ -2.11
CD28P10747 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.84□□□□□ -2.11
CD28P10747 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.84□□□□□ -2.11
CD28P10747 AC103810.1-201ENST00000579873 453 ntBASIC1.84□□□□□ -2.11
CD28P10747 MIR4648-201ENST00000580107 72 ntBASIC1.84□□□□□ -2.11
CD28P10747 MIR4293-201ENST00000584305 78 ntBASIC1.84□□□□□ -2.11
CD28P10747 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC061975.8-201ENST00000587058 721 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC097468.3-201ENST00000607956 456 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC007038.2-201ENST00000608095 740 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC245517.5-201ENST00000611529 162 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
CD28P10747 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.84□□□□□ -2.11
CD28P10747 MIR7843-201ENST00000622274 79 ntBASIC1.84□□□□□ -2.11
CD28P10747 MIR6873-201ENST00000622788 63 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC106754.1-201ENST00000562632 1513 ntBASIC1.84□□□□□ -2.11
CD28P10747 AC110491.1-201ENST00000562191 2010 ntBASIC1.84□□□□□ -2.12
CD28P10747 MTND5P29-201ENST00000458676 1807 ntBASIC1.84□□□□□ -2.12
CD28P10747 AL355596.1-201ENST00000565399 3996 ntBASIC1.83□□□□□ -2.12
CD28P10747 RNU6-884P-201ENST00000363889 107 ntBASIC1.83□□□□□ -2.12
CD28P10747 SNORA41-201ENST00000384675 132 ntBASIC1.83□□□□□ -2.12
CD28P10747 RNU6-750P-201ENST00000390946 107 ntBASIC1.83□□□□□ -2.12
CD28P10747 NDUFS5P4-201ENST00000412983 318 ntBASIC1.83□□□□□ -2.12
CD28P10747 AC096649.2-201ENST00000416186 393 ntBASIC1.83□□□□□ -2.12
CD28P10747 ZNF90P2-204ENST00000419323 1075 ntBASIC1.83□□□□□ -2.12
CD28P10747 SKA2P1-201ENST00000425592 390 ntBASIC1.83□□□□□ -2.12
CD28P10747 ISCA1P1-201ENST00000426679 387 ntBASIC1.83□□□□□ -2.12
CD28P10747 HMGB1P9-201ENST00000429856 646 ntBASIC1.83□□□□□ -2.12
CD28P10747 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.83□□□□□ -2.12
CD28P10747 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CD28P10747 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.83□□□□□ -2.12
CD28P10747 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.83□□□□□ -2.12
CD28P10747 ELOCP30-201ENST00000447108 299 ntBASIC1.83□□□□□ -2.12
CD28P10747 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.83□□□□□ -2.12
CD28P10747 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.83□□□□□ -2.12
CD28P10747 AC233279.1-201ENST00000455300 423 ntBASIC1.83□□□□□ -2.12
CD28P10747 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.83□□□□□ -2.12
CD28P10747 RPL26P9-201ENST00000457466 433 ntBASIC1.83□□□□□ -2.12
CD28P10747 AC073901.1-201ENST00000462471 408 ntBASIC1.83□□□□□ -2.12
CD28P10747 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms