Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC108734.1-201ENST00000439549 399 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 HMGB3P11-201ENST00000440127 604 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC6P09630 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC6P09630 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC6P09630 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC6P09630 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC6P09630 RPS20P24-201ENST00000457473 361 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 PMCHL2-203ENST00000457791 237 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RPS27AP1-201ENST00000475545 471 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 AP001086.1-201ENST00000494882 321 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 NIPA2P2-201ENST00000496376 1083 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 MTCO2P30-201ENST00000503662 364 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC6P09630 AC114797.1-201ENST00000514003 728 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RNA5SP367-201ENST00000516557 118 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RNU6-835P-201ENST00000516974 104 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC6P09630 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC6P09630 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC6P09630 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC6P09630 KC877982.1-201ENST00000602313 470 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 AC116312.1-201ENST00000606841 314 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC6P09630 AC009902.3-201ENST00000606235 2172 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HOXC6P09630 AP001486.2-201ENST00000561652 5113 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC6P09630 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC6P09630 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC6P09630 ZNF680P1-201ENST00000436625 1469 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 RNU6-989P-201ENST00000362756 107 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 Y_RNA.61-201ENST00000362835 102 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 RNU6-1120P-201ENST00000362988 108 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 RNU5E-8P-201ENST00000363502 116 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 RNU6-39P-201ENST00000384344 107 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 MIR19A-201ENST00000384878 82 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 RNU6-1068P-201ENST00000410958 103 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 RNU2-41P-201ENST00000410991 178 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 MTND4P28-201ENST00000426217 387 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC6P09630 EZH2P1-201ENST00000431167 291 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 GPR143P-201ENST00000434155 205 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC6P09630 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC6P09630 AC093156.1-201ENST00000440382 670 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC6P09630 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC6P09630 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC6P09630 RPS20P20-201ENST00000460498 340 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 RPL23AP62-201ENST00000463396 453 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AP000852.1-201ENST00000472460 573 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 OR5H5P-201ENST00000503164 928 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AC083906.5-201ENST00000503722 328 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC6P09630 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC6P09630 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC6P09630 AC017037.2-201ENST00000513850 890 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 SCARNA20.6-201ENST00000517251 106 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 CENPUP1-201ENST00000526649 1202 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AC123904.3-201ENST00000547218 814 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC6P09630 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC6P09630 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.49□□□□□ -1.85
HOXC6P09630 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC6P09630 UBE2V2P2-201ENST00000587677 504 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AC098848.2-201ENST00000588023 330 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AL117336.2-201ENST00000602435 335 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AL158211.4-201ENST00000606988 584 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 TUG1_1.1-201ENST00000610654 145 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AC245517.5-201ENST00000611529 162 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC6P09630 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC6P09630 AC010338.1-201ENST00000621823 717 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 AC099654.5-201ENST00000636479 350 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC6P09630 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC6P09630 AF117829.1-206ENST00000621883 3802 ntBASIC3.49□□□□□ -1.85
HOXC6P09630 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
HOXC6P09630 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC6P09630 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC6P09630 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HOXC6P09630 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC6P09630 AC092326.2-201ENST00000624772 1561 ntBASIC3.48□□□□□ -1.85
HOXC6P09630 AC007496.3-201ENST00000624987 3443 ntBASIC3.48□□□□□ -1.85
HOXC6P09630 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC6P09630 FTLP6-201ENST00000355274 422 ntBASIC3.48□□□□□ -1.85
HOXC6P09630 RNU6-223P-201ENST00000362830 107 ntBASIC3.48□□□□□ -1.85
HOXC6P09630 RNU6-451P-201ENST00000362921 107 ntBASIC3.48□□□□□ -1.85
HOXC6P09630 RNY3P3-201ENST00000363816 102 ntBASIC3.48□□□□□ -1.85
HOXC6P09630 Y_RNA.813-201ENST00000364639 102 ntBASIC3.48□□□□□ -1.85
HOXC6P09630 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HOXC6P09630 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC6P09630 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC6P09630 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.48□□□□□ -1.85
HOXC6P09630 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC6P09630 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
HOXC6P09630 AC016691.1-201ENST00000441321 413 ntBASIC3.48□□□□□ -1.85
HOXC6P09630 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms