Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
CXCL1P09341 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCL1P09341 RNU6-970P-201ENST00000516312 107 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCL1P09341 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.24□□□□□ -2.21
CXCL1P09341 AC084851.1-201ENST00000529105 249 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.24□□□□□ -2.21
CXCL1P09341 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.24□□□□□ -2.21
CXCL1P09341 ARL2BPP2-201ENST00000550907 489 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 AC022254.1-201ENST00000567857 235 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 MIR4666A-201ENST00000580160 79 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 uc_338.5-201ENST00000611839 155 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 AC091304.6-201ENST00000619761 202 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCL1P09341 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.24□□□□□ -2.21
CXCL1P09341 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCL1P09341 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CXCL1P09341 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
CXCL1P09341 MTCO1P9-201ENST00000505577 1534 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CXCL1P09341 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CXCL1P09341 RNU6-19P-201ENST00000384718 107 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 MIR217-201ENST00000384817 110 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 MIR518A2-201ENST00000384966 87 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 MIR506-201ENST00000384998 124 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 MIR95-201ENST00000385072 81 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 MIR934-201ENST00000401241 83 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 TPMTP3-201ENST00000411928 735 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 MTATP6P27-201ENST00000416987 621 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.23□□□□□ -2.21
CXCL1P09341 SKA2P1-201ENST00000425592 390 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.23□□□□□ -2.21
CXCL1P09341 AL139415.2-201ENST00000431968 163 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC234064.1-201ENST00000436312 247 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 MTND2P29-201ENST00000438595 412 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC003989.2-201ENST00000440224 169 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 MTND3P4-201ENST00000453537 303 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.23□□□□□ -2.21
CXCL1P09341 RPL23AP63-201ENST00000498752 471 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 HMGB1P35-201ENST00000503360 598 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC008834.1-201ENST00000511612 175 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AP004607.1-201ENST00000524456 203 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.23□□□□□ -2.21
CXCL1P09341 AC074050.1-201ENST00000563247 211 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 MIR4285-201ENST00000581001 85 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.23□□□□□ -2.21
CXCL1P09341 AL031274.2-201ENST00000599419 203 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 SEPT7P9-203ENST00000604116 343 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC091152.3-201ENST00000604227 325 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC011451.2-201ENST00000604303 598 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.23□□□□□ -2.21
CXCL1P09341 MIR5739-201ENST00000619803 80 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC002550.2-201ENST00000621246 394 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CXCL1P09341 AC005539.1-201ENST00000443768 1479 ntBASIC1.23□□□□□ -2.21
CXCL1P09341 RNU1-62P-201ENST00000362599 164 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 RNU6-492P-201ENST00000363035 104 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
CXCL1P09341 SUGT1P1-201ENST00000379514 476 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CXCL1P09341 RPL26P27-201ENST00000414397 437 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 Z98742.3-201ENST00000418637 326 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC007435.1-201ENST00000421086 415 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 Z93242.1-201ENST00000427102 353 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.22□□□□□ -2.21
CXCL1P09341 SNRPEP9-201ENST00000436794 238 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 RNFT1P2-201ENST00000443064 757 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 RPL7P36-201ENST00000444633 681 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.22□□□□□ -2.21
CXCL1P09341 CYP2C59P-201ENST00000457790 269 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC026410.2-201ENST00000460281 156 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AL160314.1-201ENST00000490836 438 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC010460.2-201ENST00000509054 677 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.22□□□□□ -2.21
CXCL1P09341 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.22□□□□□ -2.21
CXCL1P09341 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.22□□□□□ -2.21
CXCL1P09341 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CXCL1P09341 GNAI2P1-201ENST00000541815 315 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.22□□□□□ -2.21
CXCL1P09341 AC005951.2-201ENST00000576282 495 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.22□□□□□ -2.21
CXCL1P09341 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CXCL1P09341 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.22□□□□□ -2.21
CXCL1P09341 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.22□□□□□ -2.21
CXCL1P09341 MIR4713-201ENST00000582691 75 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC005261.5-201ENST00000596280 355 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AL357094.1-201ENST00000603845 844 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AL158211.4-201ENST00000606988 584 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC016911.1-201ENST00000613297 452 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AL118556.2-201ENST00000614375 824 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC003001.2-201ENST00000616294 831 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AL590808.1-201ENST00000618696 141 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 AC007490.1-201ENST00000624321 703 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 HPVC1-201ENST00000629899 1198 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CXCL1P09341 CDC27P3-201ENST00000635418 1910 ntBASIC1.22□□□□□ -2.21
CXCL1P09341 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CXCL1P09341 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.22□□□□□ -2.21
CXCL1P09341 MTND5P29-201ENST00000458676 1807 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms